Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen05g033070 UDP-XYL synthase 6 (UXS6) | FUNCTIONS IN: coenzyme binding, binding, catalytic activity | INVOLVED IN: cellular metabolic process, nucleotide-sugar metabolic process, metabolic process | LOCATED IN: plasma membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase , NAD(P)-binding domain | BEST Arabidopsis thaliana protein match is: UDP-XYL synthase 5 Spenn-ch05 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G7430 LG-5 + View
Aethionema arabicum Aa31sc23G290 sc-23 - View
Acer truncatum Atru.chr3.3841 chr3 - View
Acer truncatum Atru.chr12.495 chr12 + View
Actinidia chinensis Actinidia33859 Lachesis_group15 + View
Actinidia chinensis Actinidia07722 Lachesis_group3 - View
Arabidopsis lyrata AL5G25270 scaffold_5 - View
Arabidopsis lyrata AL4G23290 scaffold_4 - View
Amaranthus hybridus Ah.08g219130 UDP-glucuronic acid decarboxylase 3 (EC 4.1.1.35) (UDP-XYL synthase 3) (UDP-glucuronate decarboxylase 3) (UGD) (UXS-3) AmaHy_arrow1_Scaffold_8 - View
Aquilegia oxysepala Aqoxy4G02975_Aqoxy4G02976 CHR04 + View
Arabidopsis thaliana AT3G46440 UDP-XYL synthase 5 encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose%2C which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes. UDP-XYL synthase 5 (UXS5)%3B FUNCTIONS IN: UDP-glucuronate decarboxylase activity%2C catalytic activity%3B INVOLVED IN: nucleotide-sugar metabolic process%2C D-xylose metabolic process%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509)%2C NAD(P)-binding domain (InterPro:IPR016040)%3B BEST Arabidopsis thaliana protein match is: UDP-glucuronic acid decarboxylase 3 (TAIR:AT5G59290.2)%3B Has 43250 Blast hits to 43194 proteins in 3018 species: Archae - 841%3B Bacteria - 25483%3B Metazoa - 667%3B Fungi - 365%3B Plants - 1392%3B Viruses - 87%3B Other Eukaryotes - 14415 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT2G28760 UDP-XYL synthase 6 UDP-XYL synthase 6 (UXS6)%3B FUNCTIONS IN: coenzyme binding%2C binding%2C catalytic activity%3B INVOLVED IN: cellular metabolic process%2C nucleotide-sugar metabolic process%2C metabolic process%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509)%2C NAD(P)-binding domain (InterPro:IPR016040)%3B BEST Arabidopsis thaliana protein match is: UDP-XYL synthase 5 (TAIR:AT3G46440.2)%3B Has 45408 Blast hits to 45356 proteins in 3037 species: Archae - 861%3B Bacteria - 26677%3B Metazoa - 782%3B Fungi - 385%3B Plants - 1435%3B Viruses - 88%3B Other Eukaryotes - 15180 (source: NCBI BLink). UDP-XYL synthase 6 (UXS6)%3B FUNCTIONS IN: coenzyme binding%2C binding%2C catalytic activity%3B INVOLVED IN: cellular metabolic process%2C nucleotide-sugar metabolic process%2C metabolic process%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509)%2C NAD(P)-binding domain (InterPro:IPR016040)%3B BEST Arabidopsis thaliana protein match is: UDP-XYL synthase 5 (TAIR:AT3G46440.2)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaC02g08140 ChrC02 + View
Brassica napus C04p57950 C04 - View
Brassica oleracea BolC4t27321H C4 - View
Brassica rapa BraA04t17749Z A04 - View
Beta vulgaris EL10Ac7g15981 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Chr7_EL10_PGA_scaffold5 - View
Camellia sinensis var. sinensis CSS0029710 PREDICTED: UDP-glucuronic acid decarboxylase 6-like [Populus euphratica] Chr11 - View
Camellia sinensis var. sinensis CSS0025388 UDP-glucuronate decarboxylase [Camellia oleifera] Chr1 - View
Capsicum annuum CAN.G1013.8 PGAv.1.6.scaffold1013 - View
Cicer arietinum L. Ca_01337_v3 Ca_LG1_v3 + View
Corylus avellana Haze_24056 Similar to UXS3: UDP-glucuronic acid decarboxylase 3 (Arabidopsis thaliana OX%3D3702) 6 - View
Corylus avellana Haze_17042 Similar to UXS6: UDP-glucuronic acid decarboxylase 6 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc01_g12580 UDP-glucuronic acid decarboxylase 1 chr1 - View
Coffea canephora Cc02_g08080 UDP-glucuronic acid decarboxylase 1 chr2 + View
Citrus clementina Ciclev10028768m.g scaffold_8 - View
Ceratophyllum demersum CDE09G0443 7 - View
Carpinus fangiana Cfa011470 Cfa04 - View
Carpinus fangiana Cfa001499 Cfa01 + View
Cardamine hirsuta CARHR154860 Bifunctional polymyxin resistance protein ArnA Chr5 - View
Cardamine hirsuta CARHR121880 UDP-glucuronic acid decarboxylase Chr4 - View
Carya illinoinensis CiPaw.01G284600 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Chr01 - View
Carya illinoinensis CiPaw.13G097300 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Chr13 + View
Carya illinoinensis CiPaw.02G182800 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Chr02 - View
Carica papaya Cpa.g.sc1.388 supercontig_1 - View
Carica papaya Cpa.g.sc190.9 supercontig_190 + View
Chenopodium quinoa AUR62001819 UXS6: UDP-glucuronic acid decarboxylase 6 C_Quinoa_Scaffold_2716 + View
Chenopodium quinoa AUR62009605 UXS6: UDP-glucuronic acid decarboxylase 6 C_Quinoa_Scaffold_2493 + View
Capsella rubella Carub.0004s0976 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED scaffold_4 - View
Capsella rubella Carub.0005s1224 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED scaffold_5 - View
Daucus carota DCAR_027650 hypothetical protein DCARv2_Chr8 - View
Daucus carota DCAR_005312 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv31440 GWHABJS00000004 - View
Davidia involucrata Dinv25996 GWHABJS00000009 + View
Durio zibethinus Duzib170G1010 NW_019167871.1 + View
Eutrema salsugineum Thhalv10002602m.g scaffold_4 + View
Eutrema salsugineum Thhalv10016891m.g PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED scaffold_10 - View
Fragaria x ananassa FAN01G3137 K08678 - UDP-glucuronate decarboxylase (UXS1, uxs) Fvb7-4 + View
Fragaria x ananassa FAN14G0467 PTHR10366//PTHR10366:SF361 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Fvb6-1 + View
Fragaria x ananassa FAN03G1241 K08678 - UDP-glucuronate decarboxylase (UXS1, uxs) Fvb7-3 + View
Fragaria x ananassa FAN06G3454 K08678 - UDP-glucuronate decarboxylase (UXS1, uxs) Fvb7-2 - View
Fragaria x ananassa FAN21G3092 K08678 - UDP-glucuronate decarboxylase (UXS1, uxs) Fvb3-2 - View
Fragaria x ananassa FAN10G2438 K08678 - UDP-glucuronate decarboxylase (UXS1, uxs) Fvb7-1 - View
Fragaria x ananassa FAN02G3992 PTHR10366//PTHR10366:SF361 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Fvb6-4 - View
Fragaria x ananassa FAN06G4919 K08678 - UDP-glucuronate decarboxylase (UXS1, uxs) Fvb7-2 + View
Gossypium hirsutum Gohir.D03G127900 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED D03 + View
Gossypium hirsutum Gohir.A05G097200 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED A05 + View
Gossypium hirsutum Gohir.A03G040100 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED A03 - View
Glycine max Glyma.15G040000 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Gm15 + View
Glycine max Glyma.13G334500 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Gm13 - View
Glycine max Glyma.11G141200 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Gm11 + View
Glycine max Glyma.12G064600 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Gm12 + View
Gossypium raimondii Gorai.009G100900 Chr09 + View
Gossypium raimondii Gorai.003G134600 Chr03 + View
Lotus japonicus Lj3g0024563 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED chr3 + View
Lonicera japonica Lj1A157T40 GWHAAZE00000001 + View
Lonicera japonica Lj1A935T51 GWHAAZE00000001 - View
Magnolia biondii MBI05_g10861_MAGBIO AED:0.18 Chr05 - View
Magnolia biondii MBI14_g11679_MAGBIO AED:0.18 Chr14 - View
Malus domestica MD03G1096800 UDP-XYL synthase 6 Chr03 + View
Malus domestica MD07G1194900 UDP-XYL synthase 5 Chr07 - View
Malus domestica MD11G1143300 UDP-XYL synthase 6 Chr11 + View
Medicago truncatula Medtr2g096660 UDP-glucuronic acid decarboxylase chr2 - View
Oryza sativa ssp. japonica Os03g0278000 Similar to D-TDP-glucose dehydratase. UDP-glucuronic acid decarboxylase. chr03 + View
Petunia axillaris Peaxi162Scf00406g00236 UDP-glucuronic acid decarboxylase 3 Peaxi162Scf00406 - View
Punica granatum PGR044G0056 NC_045134.1 - View
Prunus persica Prupe.6G081100 Pp06 + View
Prunus persica Prupe.6G247300 PTHR10366//PTHR10366:SF361 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Pp06 + View
Populus trichocarpa Potri.008G053100 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Chr08 - View
Phaseolus vulgaris Phvul.L004043 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED scaffold_15 - View
Phaseolus vulgaris Phvul.011G065700 PTHR10366//PTHR10366:SF323 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Chr11 + View
Quercus lobata QL08p059108 8 - View
Rosa chinensis RcHm_v2.0_Chr5g0063761 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim09G0164900 chr09 - View
Salix brachista Sabra08G0038200 GWHAAZH00000008 - View
Simmondsia chinensis Sc21g0005620 GWHAASQ00000021 - View
Solanum lycopersicum Solyc11g066150.3 UDP-glucuronic acid decarboxylase (AHRD V3.3 *** G5DXR5_SILLA) SL4.0ch11 + View
Solanum lycopersicum Solyc05g054590.4 UDP-glucuronic acid decarboxylase (AHRD V3.3 *-* G5DXR5_SILLA) SL4.0ch05 + View
Schrenkiella parvula Sp4g11610 K08678 - UDP-glucuronate decarboxylase (UXS1, uxs) ch4-6 - View
Schrenkiella parvula Sp5g15240 K08678 - UDP-glucuronate decarboxylase (UXS1, uxs) ch5-1 + View
Solanum tuberosum PGSC0003DMG400000404 UDP-glucuronate decarboxylase 2 ST4.03ch11 + View
Solanum tuberosum PGSC0003DMG400023524 UDP-glucuronate decarboxylase 1 ST4.03ch05 + View
Selenicereus undatus Hund18925 Scaffold_33675 + View
Selenicereus undatus Hund04985 Scaffold_19641 + View
Trochodendron aralioides TAR633G0571 group2 + View
Theobroma cacao Thecc.05G047100 UDP-glucuronic acid decarboxylase 1 Chromosome_5 - View
Theobroma cacao Thecc.10G046200 UDP-XYL synthase 6 Chromosome_10 + View
Theobroma cacao Thecc.09G325300 UDP-XYL synthase 5 Chromosome_9 + View
Tarenaya hassleriana THA.LOC104807015 UDP-glucuronic acid decarboxylase 1 NW_010962392.1 - View
Tarenaya hassleriana THA.LOC104799450 UDP-glucuronic acid decarboxylase 5 NW_010968505.1 + View
Trifolium pratense TPR.G34279 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI75G1429 NC_052253.1 + View
Tripterygium wilfordii TWI31G0656 NC_052233.1 + View
Vigna mungo VMungo1080G1896 CM024079.1 + View
Vitis vinifera GSVIVG01016574001 chr13 - View
Vitis vinifera GSVIVG01025003001 chr6 - View