Gene: AT3G46440

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G46440
  • Transcript Identifier AT3G46440.1
  • Gene Type Coding gene
  • Location Chr3 : 17089268-17091611 : negative

Gene Family Information

  • ID HOM05D000739
  • #Genes/#Species 792/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G46440.1
  • symbol UXS5
  • uniprot Q9SN95

Descriptions

  • Description UDP-XYL synthase 5
  • Computational description UDP-XYL synthase 5 (UXS5); FUNCTIONS IN: UDP-glucuronate decarboxylase activity, catalytic activity; INVOLVED IN: nucleotide-sugar metabolic process, D-xylose metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-glucuronic acid decarboxylase 3 (TAIR:AT5G59290.2); Has 43250 Blast hits to 43194 proteins in 3018 species: Archae - 841; Bacteria - 25483; Metazoa - 667; Fungi - 365; Plants - 1392; Viruses - 87; Other Eukaryotes - 14415 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042732
IEA
GOA DatabaseD-xylose metabolic process
GO:0042732
IBA
TAS
Gene OntologyD-xylose metabolic process1 2
GO:0042732
IEA
InterProD-xylose metabolic process
GO:0045492
IGI
Gene Ontologyxylan biosynthetic process3
GO:0033320
IEA
Gene OntologyUDP-D-xylose biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070403
IEA
GOA DatabaseNAD+ binding
GO:0070403
IBA
Gene OntologyNAD+ binding2
GO:0070403
IEA
InterProNAD+ binding
GO:0048040
IEA
GOA DatabaseUDP-glucuronate decarboxylase activity
GO:0048040
IDA
ISS, IBA
Gene OntologyUDP-glucuronate decarboxylase activity1 2 3
GO:0048040
IEA
InterProUDP-glucuronate decarboxylase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0016831
IEA
GOA Databasecarboxy-lyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
Gene Ontologycytosol4
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
IBA
Gene Ontologycytoplasm2 3
GO:0005886
ISM
Gene Ontologyplasma membrane
GO:0009507
HDA
Gene Ontologychloroplast5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016040 NAD(P)-binding domain
IPR044516 UDP-glucuronic acid decarboxylase
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
3.13.5.1 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-xylose biosynthesis.UDP-D-glucuronic acid decarboxylase