Gene: Sopen11g023650

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g023650
  • Transcript Identifier Sopen11g023650.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 57493070-57496702 : positive

Gene Family Information

  • ID HOM05D000138
  • #Genes/#Species 2624/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g023650.1

Descriptions

  • Description Encodes a member of the AINTEGUMENTA-like (AIL) subclass of the AP2/EREBP family of transcription factors and is essential for quiescent center (QC) specification and stem cell activity. It is a key effector for establishment of the stem cell niche during embryonic pattern formation. It is transcribed in response to auxin accumulation and is dependent on auxin response transcription factors. | PLETHORA 2 (PLT2) | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G51190
GO:0019827
ISO
PLAZA Integrative Orthologystem cell population maintenance AT1G51190
GO:0010449
ISO
PLAZA Integrative Orthologyroot meristem growth AT1G51190
GO:0010073
ISO
PLAZA Integrative Orthologymeristem maintenance AT1G51190
GO:0007389
ISO
PLAZA Integrative Orthologypattern specification process AT1G51190
GO:0000723
ISO
PLAZA Integrative Orthologytelomere maintenance AT1G51190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G51190
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G20840

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G20840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036955 AP2/ERF domain superfamily
IPR001471 AP2/ERF domain
IPR016177 DNA-binding domain superfamily
Mapman id Description
15.5.7.3 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (AP2)