Gene: AT1G51190

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G51190
  • Transcript Identifier AT1G51190.1
  • Gene Type Coding gene
  • Location Chr1 : 18977517-18980305 : positive

Gene Family Information

  • ID HOM05D000138
  • #Genes/#Species 2624/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G51190.1
  • symbol PLT2
  • full_name PLETHORA 2
  • uniprot Q5YGP7

Descriptions

  • Description Integrase-type DNA-binding superfamily protein
  • Computational description PLETHORA 2 (PLT2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G20840.1); Has 7787 Blast hits to 5250 proteins in 253 species: Archae - 0; Bacteria - 8; Metazoa - 4; Fungi - 0; Plants - 7694; Viruses - 2; Other Eukaryotes - 79 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010073
IGI
Gene Ontologymeristem maintenance1
GO:0006355
IEA
Gene Ontologyregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009873
IEA
GOA Databaseethylene-activated signaling pathway
GO:0009734
IEA
GOA Databaseauxin-activated signaling pathway
GO:0010449
IGI
Gene Ontologyroot meristem growth1
GO:0000723
IDA
Gene Ontologytelomere maintenance1
GO:0048364
IMP, IGI
Gene Ontologyroot development2 3
GO:0019827
IMP
Gene Ontologystem cell population maintenance2
GO:0007389
IMP
Gene Ontologypattern specification process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity4
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0005515
IPI
Gene Ontologyprotein binding5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
NAS
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036955 AP2/ERF domain superfamily
IPR001471 AP2/ERF domain
IPR016177 DNA-binding domain superfamily
Mapman id Description
15.5.7.3 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (AP2)