Gene: Sopen11g013030
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g013030
- Transcript Identifier Sopen11g013030.1
- Gene Type Coding gene
- Location Spenn-ch11 : 19398687-19407808 : positive
Gene Family Information
- ID HOM05D000047
- #Genes/#Species 4571/73
- Phylogenetic origin
- ID ORTHO05D000044
- #Genes/#Species 2976/66
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen11g013030.1
Descriptions
- Description RNA-directed DNA polymerase homolog (Reverse transcriptase homolog) - Oenothera bertiana (Berteros evening primrose), hypothetical protein | DNA/RNA polymerases superfamily protein.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015074 | IEA | InterPro | DNA integration |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0004523 | IEA | InterPro | RNA-DNA hybrid ribonuclease activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR041577 | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain |
| IPR036397 | Ribonuclease H superfamily |
| IPR005162 | Retrotransposon gag domain |
| IPR000477 | Reverse transcriptase domain |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR021109 | Aspartic peptidase domain superfamily |
| IPR000467 | G-patch domain |
| IPR001584 | Integrase, catalytic core |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR002156 | Ribonuclease H domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |