Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 1.9e-220 768.8 391 100.0
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 1.0e-200 703.4 376 94.4
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 1.2e-182 643.3 396 84.1
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 8.0e-182 640.6 399 83.2
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 2.8e-171 605.5 312 97.8
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 4.0e-157 558.5 380 78.4
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 4.6e-145 518.5 395 70.1
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 1.1e-143 513.8 389 69.7
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 1.8e-141 506.5 390 67.2
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 2.3e-141 506.1 419 66.1
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 3.1e-141 505.8 382 69.1
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 2.0e-140 503.1 382 68.6
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 3.7e-139 498.8 388 68.6
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 1.1e-138 497.3 384 67.7
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 9.2e-138 494.2 376 67.0
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 2.7e-137 492.7 363 69.4
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 2.7e-137 492.7 392 68.6
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 7.8e-137 491.1 379 68.9
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 1.7e-136 490.0 397 65.0
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 3.0e-136 489.2 382 67.3
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 6.6e-136 488.0 382 67.3
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 8.6e-136 487.6 393 64.6
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 8.6e-136 487.6 356 69.4
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 1.5e-135 486.9 413 63.9
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 1.9e-135 486.5 387 67.7
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 3.3e-135 485.7 392 65.3
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 7.3e-135 484.6 379 66.8
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 7.3e-135 484.6 398 65.3
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 3.6e-134 482.3 413 62.5
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 4.7e-134 481.9 370 65.1
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 6.2e-134 481.5 368 66.3
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 1.4e-133 480.3 371 68.2
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 1.4e-133 480.3 385 65.7
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 5.2e-133 478.4 365 66.3
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 5.2e-133 478.4 344 69.5
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 1.2e-132 477.2 345 71.3
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 3.4e-132 475.7 340 70.9
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 5.8e-132 474.9 371 66.0
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 7.6e-132 474.6 381 66.7
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 1.3e-131 473.8 377 68.2
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 1.3e-131 473.8 358 67.3
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 5.4e-130 468.4 344 68.6
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 5.4e-130 468.4 357 67.5
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 9.3e-130 467.6 435 60.9
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 2.1e-129 466.5 376 65.7
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 3.5e-129 465.7 379 64.9
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 5.1e-128 461.8 361 67.9
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 8.7e-128 461.1 373 65.1
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 1.9e-127 459.9 382 62.6
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.9e-127 459.9 382 64.9
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 1.3e-126 457.2 358 64.2
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 2.8e-126 456.1 371 63.1
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 3.6e-126 455.7 341 67.4
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 3.6e-126 455.7 393 62.8
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 3.6e-126 455.7 402 62.7
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 4.8e-126 455.3 369 64.5
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 8.1e-126 454.5 317 71.9
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 6.9e-125 451.4 310 71.3
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 1.5e-124 450.3 373 61.9
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 1.7e-123 446.8 363 64.2
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 2.2e-123 446.4 380 62.6
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 2.2e-123 446.4 357 64.7
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 1.4e-122 443.7 386 60.1
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 1.9e-122 443.4 362 63.5
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 1.9e-122 443.4 308 70.5
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 1.9e-122 443.4 368 62.0
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 2.4e-122 443.0 346 66.8
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 3.2e-122 442.6 347 65.1
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 5.4e-122 441.8 349 65.0
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 9.3e-122 441.0 350 65.1
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 1.2e-121 440.7 348 65.5
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 2.7e-121 439.5 313 70.0
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 6.0e-121 438.3 347 64.6
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 6.0e-121 438.3 355 63.9
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 6.0e-121 438.3 349 64.8
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 6.0e-121 438.3 350 65.1
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 2.3e-120 436.4 365 60.3
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 5.6e-119 431.8 312 67.9
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 1.3e-118 430.6 348 64.7
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 1.6e-118 430.3 392 59.2
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 2.8e-118 429.5 368 61.1
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 6.2e-118 428.3 372 59.7
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 1.1e-114 417.5 348 61.8
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 1.1e-111 407.5 276 73.6
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 8.1e-110 401.4 305 66.2
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 4.5e-108 395.6 360 59.4
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 7.1e-106 388.3 316 64.2
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 2.7e-105 386.3 388 53.6
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 1.3e-104 384.0 333 59.5
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 5.7e-103 378.6 319 63.6
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 5.9e-100 368.6 312 58.7
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 5.9e-100 368.6 312 58.7
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 9.3e-98 361.3 370 53.5
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 1.6e-97 360.5 325 55.1
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 6.1e-97 358.6 305 63.3
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 3.9e-96 355.9 355 53.8
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 5.1e-96 355.5 309 57.9
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 1.8e-93 347.1 232 72.8
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 2.2e-91 340.1 340 52.9
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 4.1e-85 319.3 381 49.1
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 5.9e-76 288.9 172 80.2
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 7.7e-76 288.5 169 79.9
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 6.5e-75 285.4 267 58.4
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 3.3e-71 273.1 174 75.9
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 4.8e-70 269.2 168 76.2
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 5.5e-66 255.8 376 40.2
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 1.6e-65 254.2 410 40.0
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 9.8e-63 245.0 176 70.5
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 3.6e-57 226.5 128 83.6
MBI06_g44498_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 2.0e-52 210.7 232 50.9
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 1.5e-39 167.9 138 64.5
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 7.5e-31 139.0 95 69.5
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 2.6e-23 114.0 369 28.2
Cfa022494 Carpinus fangiana HOM05D002121 ORTHO05D008891 1.5e-18 98.2 201 36.3
Hma1.2p1_0612F.1_g188810 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 1.2e-17 95.1 57 82.5
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 2.8e-17 94.0 51 84.3
CBR_g3761 Chara braunii HOM05D002121 ORTHO05D008891 8.7e-11 72.4 195 29.7
PRCOL_00004066 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 9.6e-10 68.9 144 30.6


User provided reference genes

Program Settings