Gene: Sopen10g007500
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen10g007500
- Transcript Identifier Sopen10g007500.1
- Gene Type Coding gene
- Location Spenn-ch10 : 7974749-7977796 : negative
Gene Family Information
- ID HOM05D001546
- #Genes/#Species 413/99
- Phylogenetic origin
- ID ORTHO05D002908
- #Genes/#Species 255/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen10g007500.1
Descriptions
- Description Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato), Transketolase | FUNCTIONS IN: catalytic activity, transketolase activity | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 16 growth stages | CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal , Transketolase, C-terminal , Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II , Transketolase-like, pyrimidine-binding domain , Transketolase binding site , Transketolase, bacterial-like , Transketolase-like, C-terminal | BEST Arabidopsis thaliana protein match is: Transketolase ., Transketolase, N-terminal
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT2G45290 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004802 | IEA | InterPro | transketolase activity | |
| GO:0005509 | ISO | PLAZA Integrative Orthology | calcium ion binding | Zm00001eb378030 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G60750 |
| GO:0030145 | ISO | PLAZA Integrative Orthology | manganese ion binding | Zm00001eb378030 |
| GO:0050897 | ISO | PLAZA Integrative Orthology | cobalt ion binding | Zm00001eb378030 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT2G45290 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT2G45290 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT3G60750 |
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT2G45290 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009014 | Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II |
| IPR005478 | Transketolase, bacterial-like |
| IPR033248 | Transketolase, C-terminal domain |
| IPR029061 | Thiamin diphosphate-binding fold |
| IPR005475 | Transketolase-like, pyrimidine-binding domain |
| IPR005474 | Transketolase, N-terminal |
| IPR033247 | Transketolase family |