Gene: AT3G60750
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G60750
- Transcript Identifier AT3G60750.1
- Gene Type Coding gene
- Location Chr3 : 22454004-22456824 : positive
Gene Family Information
- ID HOM05D001546
- #Genes/#Species 413/99
- Phylogenetic origin
- ID ORTHO05D002908
- #Genes/#Species 255/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G60750.1
- Alias AtTKL1,TKL1,transketolase 1
- uniprot Q8RWV0
Descriptions
- Description Transketolase
- Computational description Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, bacterial-like (InterPro:IPR005478), Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT2G45290.1); Has 19296 Blast hits to 19203 proteins in 2759 species: Archae - 202; Bacteria - 11440; Metazoa - 321; Fungi - 314; Plants - 204; Viruses - 0; Other Eukaryotes - 6815 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046686 | IEP | GOA Database | response to cadmium ion | |
| GO:0006098 | IBA | Gene Ontology | pentose-phosphate shunt | 1 |
| GO:0019253 | IEA | Gene Ontology | reductive pentose-phosphate cycle |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004802 | IBA IEA | Gene Ontology | transketolase activity | 1 |
| GO:0004802 | IEA | InterPro | transketolase activity | |
| GO:0050897 | ISO | PLAZA Integrative Orthology | cobalt ion binding | Zm00001eb378030 |
| GO:0030145 | ISO | PLAZA Integrative Orthology | manganese ion binding | Zm00001eb378030 |
| GO:0005509 | ISO | PLAZA Integrative Orthology | calcium ion binding | Zm00001eb378030 |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0003729 | IDA | Gene Ontology | mRNA binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | IDA, HDA ISM | Gene Ontology | chloroplast | 3 4 |
| GO:0009536 | IDA IEA | GOA Database | plastid | |
| GO:0009536 | HDA | Gene Ontology | plastid | 5 |
| GO:0009941 | IDA | GOA Database | chloroplast envelope | |
| GO:0009941 | HDA | Gene Ontology | chloroplast envelope | 6 |
| GO:0009570 | IEA | GOA Database | chloroplast stroma | |
| GO:0009570 | IDA, HDA | Gene Ontology | chloroplast stroma | 4 7 |
| GO:0005829 | HDA IBA, RCA | Gene Ontology | cytosol | 1 8 9 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005478 | Transketolase, bacterial-like |
| IPR005474 | Transketolase, N-terminal |
| IPR029061 | Thiamin diphosphate-binding fold |
| IPR009014 | Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II |
| IPR033248 | Transketolase, C-terminal domain |
| IPR005475 | Transketolase-like, pyrimidine-binding domain |
| IPR033247 | Transketolase family |