Gene: AT2G45290
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G45290
- Transcript Identifier AT2G45290.1
- Gene Type Coding gene
- Location Chr2 : 18672737-18675589 : positive
Gene Family Information
- ID HOM05D001546
- #Genes/#Species 413/99
- Phylogenetic origin
- ID ORTHO05D002908
- #Genes/#Species 255/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G45290.1
- Alias TKL2,transketolase 2
- uniprot F4IW47
Descriptions
- Description Transketolase
- Computational description Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, bacterial-like (InterPro:IPR005478), Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT3G60750.1); Has 19460 Blast hits to 19400 proteins in 2776 species: Archae - 200; Bacteria - 11520; Metazoa - 310; Fungi - 312; Plants - 211; Viruses - 0; Other Eukaryotes - 6907 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046686 | IEP | GOA Database | response to cadmium ion | |
| GO:0006098 | IBA | Gene Ontology | pentose-phosphate shunt | 1 |
| GO:0019253 | IEA | Gene Ontology | reductive pentose-phosphate cycle |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0050897 | ISO | PLAZA Integrative Orthology | cobalt ion binding | Zm00001eb378030 |
| GO:0030145 | ISO | PLAZA Integrative Orthology | manganese ion binding | Zm00001eb378030 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G60750 |
| GO:0005509 | ISO | PLAZA Integrative Orthology | calcium ion binding | Zm00001eb378030 |
| GO:0004802 | IEA | GOA Database | transketolase activity | |
| GO:0004802 | IBA | Gene Ontology | transketolase activity | 1 |
| GO:0004802 | IEA | InterPro | transketolase activity | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT3G60750 |
| GO:0009579 | IEA | GOA Database | thylakoid | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | IDA, HDA ISM | Gene Ontology | chloroplast | 2 3 |
| GO:0009536 | IDA IEA | GOA Database | plastid | |
| GO:0009536 | HDA | Gene Ontology | plastid | 4 |
| GO:0009535 | IEA | GOA Database | chloroplast thylakoid membrane | |
| GO:0009570 | IEA | GOA Database | chloroplast stroma | |
| GO:0009570 | IDA, HDA | Gene Ontology | chloroplast stroma | 3 5 |
| GO:0005829 | HDA IBA, RCA | Gene Ontology | cytosol | 1 6 7 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005474 | Transketolase, N-terminal |
| IPR029061 | Thiamin diphosphate-binding fold |
| IPR009014 | Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II |
| IPR005475 | Transketolase-like, pyrimidine-binding domain |
| IPR033247 | Transketolase family |
| IPR005478 | Transketolase, bacterial-like |
| IPR033248 | Transketolase, C-terminal domain |