Gene: Sopen09g024160
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen09g024160
- Transcript Identifier Sopen09g024160.1
- Gene Type Coding gene
- Location Spenn-ch09 : 68873362-68880554 : negative
Gene Family Information
- ID HOM05D000002
- #Genes/#Species 26594/98
- Phylogenetic origin
- ID ORTHO05D000001
- #Genes/#Species 28434/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen09g024160.1
Descriptions
- Description Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), hypothetical protein | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | FUNCTIONS IN: nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold .
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015074 | IEA | InterPro | DNA integration |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR001584 | Integrase, catalytic core |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR025724 | GAG-pre-integrase domain |
| IPR041577 | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain |
| IPR036397 | Ribonuclease H superfamily |
| IPR043502 | DNA/RNA polymerase superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |