Gene: Sopen07g029580

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g029580
  • Transcript Identifier Sopen07g029580.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 75142852-75153467 : negative

Gene Family Information

  • ID HOM05D004503
  • #Genes/#Species 160/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g029580.1

Descriptions

  • Description necessary for proper vacuole formation and morphogenesis in Arabidopsis | VACUOLELESS 1 (VCL1) | CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain , Vps16, N-terminal , Vacuolar protein sorting-associated protein 16 , Vps16, C-terminal
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0007033
IEA
InterProvacuole organization
GO:0045992
ISO
PLAZA Integrative Orthologynegative regulation of embryonic development AT2G38020
GO:0051469
ISO
PLAZA Integrative Orthologyvesicle fusion with vacuole AT2G38020

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0009705
ISO
PLAZA Integrative Orthologyplant-type vacuole membrane AT2G38020
GO:0033263
ISO
PLAZA Integrative OrthologyCORVET complex AT2G38020
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT2G38020
GO:0030897
ISO
PLAZA Integrative OrthologyHOPS complex AT2G38020

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016534 Vacuolar protein sorting-associated protein 16
IPR038132 Vps16, C-terminal domain superfamily
IPR006925 Vps16, C-terminal
IPR006926 Vps16, N-terminal
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
22.3.4.9.2 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.component VPS16/VCL1