Gene: Sopen03g039360

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g039360
  • Transcript Identifier Sopen03g039360.2
  • Gene Type Coding gene
  • Location Spenn-ch03 : 73468329-73476565 : negative

Gene Family Information

  • ID HOM05D001353
  • #Genes/#Species 464/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g039360.2

Descriptions

  • Description Predicted eukaryotic LigT | FUNCTIONS IN: RNA binding, catalytic activity | INVOLVED IN: RNA metabolic process, regulation of transcription | LOCATED IN: mitochondrion | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup , K Homology , K Homology, type 1 , Predicted eukaryotic LigT , RNA ligase/cyclic nucleotide phosphodiesterase , Protein kinase A anchor protein, nuclear localisation signal domain | BEST Arabidopsis thaliana protein match is: Predicted eukaryotic LigT .
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0016791
ISO
PLAZA Homology (enrichment)phosphatase activity HOM05D001353

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G16230

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036612 K Homology domain, type 1 superfamily
IPR009097 Cyclic phosphodiesterase
IPR004087 K Homology domain
IPR009210 Activating signal cointegrator 1 complex subunit 1
IPR019510 Protein kinase A anchor protein, nuclear localisation signal domain
IPR004088 K Homology domain, type 1
Mapman id Description
35.1 not assigned.annotated