Gene: Sopen03g028630

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g028630
  • Transcript Identifier Sopen03g028630.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 64395474-64399149 : negative

Gene Family Information

  • ID HOM05D002170
  • #Genes/#Species 309/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g028630.1

Descriptions

  • Description Encodes a protein predicted to have dihydropyrimidine dehydrogenase activity. Its activity has not been demonstrated in vivo, but, it is required for efficient uracil catabolism in Arabidopsis. It localizes to the plastid. | pyrimidine 1 (PYD1) | FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, dihydropyrimidine dehydrogenase (NADP ) activity | INVOLVED IN: de novo pyrimidine base biosynthetic process, uracil catabolic process, cellular response to nitrogen levels | LOCATED IN: chloroplast, plastid | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel , Dihydroorotate dehydrogenase, class 1/ 2 , Dihydroorotate dehydrogenase, class 1, core
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006210
IEA
InterProthymine catabolic process
GO:0006212
IEA
InterProuracil catabolic process
GO:0043562
ISO
PLAZA Integrative Orthologycellular response to nitrogen levels AT3G17810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017113
IEA
InterProdihydropyrimidine dehydrogenase (NADP+) activity
GO:0016627
IEA
InterProoxidoreductase activity, acting on the CH-CH group of donors
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G17810
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G17810
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT3G17810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044512 Dihydropyrimidine dehydrogenase
IPR005720 Dihydroorotate dehydrogenase domain
IPR013785 Aldolase-type TIM barrel
Mapman id Description
6.2.4.3 Nucleotide metabolism.pyrimidines.catabolism.dihydropyrimidine dehydrogenase (PYD1)