Gene: Sopen02g035760

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g035760
  • Transcript Identifier Sopen02g035760.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 56850018-56853362 : negative

Gene Family Information

  • ID HOM05D003239
  • #Genes/#Species 212/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g035760.1

Descriptions

  • Description This gene is predicted to encode a silencing group A protein. Plant lines expressing RNAi constructs directed against SGA1 have reduced levels of agrobacterium-mediated root transformation. | anti- silencing function 1b (ASF1B) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: DNA mediated transformation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | LOCATED IN: nucleus | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: Histone chaperone, ASF1-like | BEST Arabidopsis thaliana protein match is: ASF1 like histone chaperone
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006333
IEA
InterProchromatin assembly or disassembly
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT5G38110
GO:0009294
ISO
PLAZA Integrative OrthologyDNA mediated transformation AT5G38110
GO:0008361
ISO
PLAZA Integrative Orthologyregulation of cell size AT5G38110
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination AT5G38110
GO:0010091
ISO
PLAZA Integrative Orthologytrichome branching AT5G38110
GO:0031567
ISO
PLAZA Integrative Orthologymitotic cell size control checkpoint signaling AT5G38110

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G38110

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G38110
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G66740
GO:0030875
ISO
PLAZA Integrative OrthologyrDNA protrusion AT1G66740

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036747 Histone chaperone ASF1-like superfamily
IPR006818 Histone chaperone ASF1-like
Mapman id Description
12.2.4 Chromatin organisation.histone chaperone activities.histone chaperone (ASF1)