Gene: Sopen02g030390

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g030390
  • Transcript Identifier Sopen02g030390.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 52510633-52511715 : positive

Gene Family Information

  • ID HOM05D000626
  • #Genes/#Species 914/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g030390.1

Descriptions

  • Description Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) | Geranyltranstransferase (EC 2.5.1.10) | Farnesyltranstransferase (EC 2.5.1.29)) - Catharanthu, Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots. | geranylgeranyl pyrophosphate synthase 1 (GGPS1) | FUNCTIONS IN: farnesyltranstransferase activity | INVOLVED IN: isoprenoid biosynthetic process | LOCATED IN: etioplast, chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related , Terpenoid synthase , Polyprenyl synthetase | BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008299
IEA
InterProisoprenoid biosynthetic process
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G36810
GO:0045337
ISO
PLAZA Integrative Orthologyfarnesyl diphosphate biosynthetic process AT3G32040
GO:0043693
ISO
PLAZA Integrative Orthologymonoterpene biosynthetic process AT4G36810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004161
ISO
PLAZA Integrative Orthologydimethylallyltranstransferase activity AT4G36810
GO:0044687
ISO
PLAZA Integrative Orthologygeranylfarnesyl diphosphate synthase activity AT3G32040
GO:0004311
ISO
PLAZA Integrative Orthologyfarnesyltranstransferase activity AT3G14550
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G36810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT2G23800
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT4G36810
GO:0009513
ISO
PLAZA Integrative Orthologyetioplast AT3G14550
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G32040
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G49530
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G36810
GO:0010287
ISO
PLAZA Integrative Orthologyplastoglobule AT3G32040

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008949 Isoprenoid synthase domain superfamily
IPR000092 Polyprenyl synthetase
Mapman id Description
9.1.3.1.1 Secondary metabolism.terpenoids.isoprenyl diphosphate biosynthesis.geranyl diphosphate synthase complex.catalytic subunit LSU/IDS11
9.1.3.3 Secondary metabolism.terpenoids.isoprenyl diphosphate biosynthesis.isoprenyl diphosphate synthase (IDS)