Gene: AT2G23800

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G23800
  • Transcript Identifier AT2G23800.1
  • Gene Type Coding gene
  • Location Chr2 : 10131619-10132749 : negative

Gene Family Information

  • ID HOM05D000626
  • #Genes/#Species 914/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G23800.1
  • symbol GGPS2
  • Alias GGPS5,GERANYLGERANYL PYROPHOSPHATE SYNTHASE 5
  • uniprot O04046

Descriptions

  • Description geranylgeranyl pyrophosphate synthase 2
  • Computational description geranylgeranyl pyrophosphate synthase 2 (GGPS2); CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase-related (InterPro:IPR017446), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: geranylgeranyl pyrophosphate synthase 4 (TAIR:AT2G18640.1); Has 16682 Blast hits to 16674 proteins in 2948 species: Archae - 341; Bacteria - 9381; Metazoa - 343; Fungi - 516; Plants - 473; Viruses - 12; Other Eukaryotes - 5616 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008299
IEA
GOA Databaseisoprenoid biosynthetic process
GO:0008299
TAS
Gene Ontologyisoprenoid biosynthetic process1
GO:0008299
IEA
InterProisoprenoid biosynthetic process
GO:0016117
IEA
GOA Databasecarotenoid biosynthetic process
GO:0045337
IEA
Gene Ontologyfarnesyl diphosphate biosynthetic process
GO:0033386
IEA
Gene Ontologygeranylgeranyl diphosphate biosynthetic process
GO:0033384
IEA
Gene Ontologygeranyl diphosphate biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016740
IEA
GOA Databasetransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0004311
IEA
GOA Databasefarnesyltranstransferase activity
GO:0004311
IDA, IGI
IBA
Gene Ontologyfarnesyltranstransferase activity1 2
GO:0004659
IBA
Gene Ontologyprenyltransferase activity2
GO:0004161
IEA
Gene Ontologydimethylallyltranstransferase activity
GO:0004337
IEA
Gene Ontologygeranyltranstransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0005783
IDA
Gene Ontologyendoplasmic reticulum3
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008949 Isoprenoid synthase domain superfamily
IPR000092 Polyprenyl synthetase
Mapman id Description
9.1.3.3 Secondary metabolism.terpenoids.isoprenyl diphosphate biosynthesis.isoprenyl diphosphate synthase (IDS)