Gene: AT3G14550
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G14550
- Transcript Identifier AT3G14550.1
- Gene Type Coding gene
- Location Chr3 : 4884754-4885945 : negative
Gene Family Information
- ID HOM05D000626
- #Genes/#Species 914/100
- Phylogenetic origin
- ID ORTHO05D000824
- #Genes/#Species 593/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT3G14550.1
- symbol GGPS3
- uniprot Q9LUD9
Descriptions
- Description geranylgeranyl pyrophosphate synthase 3
- Computational description geranylgeranyl pyrophosphate synthase 3 (GGPS3); CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein (TAIR:AT3G14530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045337 | IEA | GOA Database | farnesyl diphosphate biosynthetic process | |
| GO:0045337 | IDA | Gene Ontology | farnesyl diphosphate biosynthetic process | 1 |
| GO:0008299 | TAS, IEA | Gene Ontology | isoprenoid biosynthetic process | 2 |
| GO:0008299 | IEA | InterPro | isoprenoid biosynthetic process | |
| GO:0016117 | IEA | GOA Database | carotenoid biosynthetic process | |
| GO:0033384 | IEA | GOA Database | geranyl diphosphate biosynthetic process | |
| GO:0033386 | IEA | GOA Database | geranylgeranyl diphosphate biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004659 | IBA | GOA Database | prenyltransferase activity | |
| GO:0004311 | IBA IEA | GOA Database | farnesyltranstransferase activity | |
| GO:0004311 | IDA | Gene Ontology | farnesyltranstransferase activity | 2 |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0004161 | IEA | GOA Database | dimethylallyltranstransferase activity | |
| GO:0004337 | IEA | GOA Database | geranyltranstransferase activity | |
| GO:0044687 | IDA | Gene Ontology | geranylfarnesyl diphosphate synthase activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | IDA ISM | Gene Ontology | chloroplast | 2 |
| GO:0010287 | IDA | Gene Ontology | plastoglobule | 1 |
| GO:0009513 | IDA | Gene Ontology | etioplast | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 9.1.3.3 | Secondary metabolism.terpenoids.isoprenyl diphosphate biosynthesis.isoprenyl diphosphate synthase (IDS) |