Gene: Sopen02g030400
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g030400
- Transcript Identifier Sopen02g030400.1
- Gene Type Coding gene
- Location Spenn-ch02 : 52512633-52513751 : positive
Gene Family Information
- ID HOM05D000626
- #Genes/#Species 914/100
- Phylogenetic origin
- ID ORTHO05D000824
- #Genes/#Species 593/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen02g030400.1
Descriptions
- Description Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots. | geranylgeranyl pyrophosphate synthase 1 (GGPS1) | FUNCTIONS IN: farnesyltranstransferase activity | INVOLVED IN: isoprenoid biosynthetic process | LOCATED IN: etioplast, chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related , Terpenoid synthase , Polyprenyl synthetase | BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008299 | IEA | InterPro | isoprenoid biosynthetic process |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 9.1.3.3 | Secondary metabolism.terpenoids.isoprenyl diphosphate biosynthesis.isoprenyl diphosphate synthase (IDS) |