Gene: Sopen02g027400
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g027400
- Transcript Identifier Sopen02g027400.1
- Gene Type Coding gene
- Location Spenn-ch02 : 50167316-50179482 : positive
Gene Family Information
- ID HOM05D004017
- #Genes/#Species 174/92
- Phylogenetic origin
- ID ORTHO05D004612
- #Genes/#Species 175/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen02g027400.1
Descriptions
- Description DNA mismatch repair protein similar to MutL. Required for normal levels of meiotic crossovers | MUTL protein homolog 3 (MLH3) | FUNCTIONS IN: mismatched DNA binding, ATP binding | INVOLVED IN: mismatch repair, reciprocal meiotic recombination | LOCATED IN: chromosome | EXPRESSED IN: inflorescence | CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein, N-terminal , MutL, C-terminal, dimerisation , DNA mismatch repair protein , DNA mismatch repair, conserved site , ATPase-like, ATP-binding domain | BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein, putative
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006298 | IEA | InterPro | mismatch repair | |
| GO:0007131 | ISO | PLAZA Integrative Orthology | reciprocal meiotic recombination | AT4G35520 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0030983 | IEA | InterPro | mismatched DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032300 | IEA | InterPro | mismatch repair complex | |
| GO:0005694 | ISO | PLAZA Integrative Orthology | chromosome | AT4G35520 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR042121 | MutL, C-terminal domain, regulatory subdomain |
| IPR038973 | DNA mismatch repair protein MutL/Mlh/Pms |
| IPR014790 | MutL, C-terminal, dimerisation |
| IPR013507 | DNA mismatch repair protein, S5 domain 2-like |
| IPR020568 | Ribosomal protein S5 domain 2-type fold |
| IPR042120 | MutL, C-terminal domain, dimerisation subdomain |
| IPR037198 | MutL, C-terminal domain superfamily |
| IPR028830 | DNA mismatch repair protein Mlh3 |
| IPR014721 | Ribosomal protein S5 domain 2-type fold, subgroup |
| IPR036890 | Histidine kinase/HSP90-like ATPase superfamily |
| Mapman id | Description |
|---|---|
| 13.3.5.5.1.6 | Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.double Holliday junction resolving protein (MLH3) |