Gene: Sopen02g027410
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g027410
- Transcript Identifier Sopen02g027410.1
- Gene Type Coding gene
- Location Spenn-ch02 : 50180958-50183426 : negative
Gene Family Information
- ID HOM05D001617
- #Genes/#Species 399/98
- Phylogenetic origin
- ID ORTHO05D002495
- #Genes/#Species 284/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen02g027410.1
Descriptions
- Description Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. | WUSCHEL related homeobox 13 (WOX13) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 30 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Homeobox , Homeodomain-like , Homeodomain-related | BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT1G20700 |
GO:0010087 | ISO | PLAZA Integrative Orthology | phloem or xylem histogenesis | AT1G20700 |
GO:0010072 | ISO | PLAZA Integrative Orthology | primary shoot apical meristem specification | AT1G20700 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G20700 |
GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT4G35550 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.3.6 | RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (WOX) |