Gene: Sopen01g018710
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g018710
- Transcript Identifier Sopen01g018710.1
- Gene Type Coding gene
- Location Spenn-ch01 : 54098557-54124531 : positive
Gene Family Information
- ID HOM05D000004
- #Genes/#Species 19584/91
- Phylogenetic origin
- ID ORTHO05D000002
- #Genes/#Species 15655/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen01g018710.1
Descriptions
- Description RNA-directed DNA polymerase homolog (Reverse transcriptase homolog) - Oenothera bertiana (Berteros evening primrose), Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR016197 | Chromo-like domain superfamily |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR005162 | Retrotransposon gag domain |
| IPR000477 | Reverse transcriptase domain |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR041373 | Reverse transcriptase, RNase H-like domain |
| IPR036875 | Zinc finger, CCHC-type superfamily |
| IPR036397 | Ribonuclease H superfamily |
| IPR021109 | Aspartic peptidase domain superfamily |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR013103 | Reverse transcriptase, RNA-dependent DNA polymerase |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |