Gene: Sopen01g003620

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g003620
  • Transcript Identifier Sopen01g003620.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 2469929-2475872 : positive

Gene Family Information

  • ID HOM05D001690
  • #Genes/#Species 383/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g003620.1

Descriptions

  • Description RNase H family protein | FUNCTIONS IN: ribonuclease H activity, nucleic acid binding | INVOLVED IN: biological_process unknown | EXPRESSED IN: 11 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal , Polynucleotidyl transferase, ribonuclease H fold , Ribonuclease H | BEST Arabidopsis thaliana protein match is: RNase H family protein
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0004523
IEA
InterProRNA-DNA hybrid ribonuclease activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G24090

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G01410
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G51080
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT1G24090

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012337 Ribonuclease H-like superfamily
IPR002156 Ribonuclease H domain
IPR036397 Ribonuclease H superfamily
Mapman id Description
15.3.6.2.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.ribonuclease (RNH1)