Gene: AT1G24090

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G24090
  • Transcript Identifier AT1G24090.1
  • Gene Type Coding gene
  • Location Chr1 : 8520834-8522737 : positive

Gene Family Information

  • ID HOM05D001690
  • #Genes/#Species 383/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G24090.1
  • uniprot F4I7R5

Descriptions

  • Description RNase H family protein
  • Computational description RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT5G51080.2); Has 3412 Blast hits to 3412 proteins in 738 species: Archae - 71; Bacteria - 1533; Metazoa - 7; Fungi - 2; Plants - 1270; Viruses - 0; Other Eukaryotes - 529 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
Gene Ontologynucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004523
IEA
GOA DatabaseRNA-DNA hybrid ribonuclease activity
GO:0004523
IDA
Gene OntologyRNA-DNA hybrid ribonuclease activity1
GO:0004523
IEA
InterProRNA-DNA hybrid ribonuclease activity
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0009534
IDA
Gene Ontologychloroplast thylakoid1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002156 Ribonuclease H domain
IPR009027 Ribosomal protein L9/RNase H1, N-terminal
IPR036397 Ribonuclease H superfamily
IPR037056 Ribonuclease H1, N-terminal domain superfamily
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
15.3.6.2.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.ribonuclease (RNH1)