Gene: Sopen01g003610

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g003610
  • Transcript Identifier Sopen01g003610.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 2464336-2466256 : positive

Gene Family Information

  • ID HOM05D000337
  • #Genes/#Species 1388/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g003610.1

Descriptions

  • Description Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff, Wolf Scheible, 2010, personal communication). | TRICHOME BIREFRINGENCE-LIKE 27 (TBL27) | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant | BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 25
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010411
IEA
InterProxyloglucan metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016413
IEA
InterProO-acetyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
IEA
InterProGolgi apparatus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR026057 PC-Esterase
IPR029962 Trichome birefringence-like family
IPR029963 Protein altered xyloglucan 4
IPR025846 PMR5 N-terminal domain
Mapman id Description
21.2.1.2.2 Cell wall organisation.hemicellulose.xyloglucan.modification and degradation.xyloglucan O-acetyltransferase (AXY4)