Gene: Solyc11g073250.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g073250.2
- Transcript Identifier Solyc11g073250.2.1
- Gene Type Coding gene
- Location SL4.0ch11 : 54334011-54334545 : negative
Gene Family Information
- ID HOM05D000221
- #Genes/#Species 1858/100
- Phylogenetic origin
- ID ORTHO05D000245
- #Genes/#Species 1286/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc11g073250.2.1
- uniprot A0A3Q7J176
- gene_id Solyc11g073250
Descriptions
- Description Histone H2A (AHRD V3.3 *** Q9ST30_SOLME)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070828 | ISO | PLAZA Integrative Orthology | heterochromatin organization | AT5G02560 |
| GO:0006342 | IBA | GOA Database | chromatin silencing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IBA IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003682 | ISO | PLAZA Integrative Orthology | chromatin binding | AT5G02560 |
| GO:0046982 | IEA | GOA Database | protein heterodimerization activity | |
| GO:0046982 | IEA | InterPro | protein heterodimerization activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005721 | ISO | PLAZA Integrative Orthology | pericentric heterochromatin | AT5G59870 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G59870 |
| GO:0000775 | ISO | PLAZA Integrative Orthology | chromosome, centromeric region | AT5G02560 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G59870 |
| GO:0000792 | ISO | PLAZA Integrative Orthology | heterochromatin | AT5G02560 |
| GO:0000786 | IEA | GOA Database | nucleosome | |
| GO:0000786 | IEA | InterPro | nucleosome | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005694 | IEA | GOA Database | chromosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.1.1.1 | Chromatin organisation.chromatin structure.DNA wrapping.histone (H2A) |