Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31sc23G90 | sc-23 | + | View | |
Acer truncatum | Atru.chr3.3832 | chr3 | - | View | |
Arabidopsis lyrata | AL8G36430 | scaffold_8 | - | View | |
Avicennia marina | MSTRG.10271 | ScioBoG_13798_HRSCAF_13862 | + | View | |
Aquilegia oxysepala | Aqoxy2G02027 | CHR02 | - | View | |
Aquilegia oxysepala | Aqoxy4G02997 | CHR04 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.QHU61X | K11251 - histone H2A (H2A) | arahy.Tifrunner.gnm1.Arahy.08 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.SJW8XV | K11251 - histone H2A (H2A) | arahy.Tifrunner.gnm1.Arahy.18 | + | View |
Arabidopsis thaliana | AT5G59870 | histone H2A 6 Encodes HTA6%2C a histone H2A protein. histone H2A 6 (HTA6)%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 27 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: histone H2A 12 (TAIR:AT5G02560.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). | Chr5 | - | View |
Brassica carinata | BcaB08g36213 | ChrB08 | + | View | |
Brassica carinata | BcaC04g19644 | ChrC04 | - | View | |
Brassica napus | A03p11430 | A03 | + | View | |
Brassica napus | C03p13220 | C03 | + | View | |
Brassica napus | C09p52390 | C09 | - | View | |
Brassica oleracea | BolC9t58108H | C9 | - | View | |
Brassica oleracea | BolC3t13785H | C3 | + | View | |
Brassica oleracea | BolC2t07303H | C2 | + | View | |
Brassica rapa | BraA02t05755Z | A02 | + | View | |
Brassica rapa | BraA10t43793Z | A10 | - | View | |
Brassica rapa | BraA03t10457Z | A03 | + | View | |
Beta vulgaris | EL10Ac7g15973 | K11251 - histone H2A (H2A) | Chr7_EL10_PGA_scaffold5 | - | View |
Camellia sinensis var. sinensis | CSS0031573 | putative histone H2A.4 [Morus notabilis] | Chr11 | - | View |
Camellia sinensis var. sinensis | CSS0009707 | histone H2A12, partial [Gossypium hirsutum] | Chr4 | - | View |
Corylus avellana | Haze_20741 | Similar to MtrDRAFT_AC149210g1v1: Probable histone H2A.1 (Medicago truncatula OX%3D3880) | 10 | - | View |
Corylus avellana | Haze_24043 | Similar to Histone H2A (Petroselinum crispum OX%3D4043) | 6 | - | View |
Coffea canephora | Cc01_g12440 | Histone H2A | chr1 | - | View |
Citrus clementina | Ciclev10029498m.g | scaffold_8 | - | View | |
Cardamine hirsuta | CARHR273460 | Histone H2A | Chr8 | - | View |
Carya illinoinensis | CiPaw.13G098100 | K11251 - histone H2A (H2A) | Chr13 | + | View |
Carya illinoinensis | CiPaw.14G071400 | KOG1756 - Histone 2A | Chr14 | + | View |
Cucumis melo | MELO3C013682.2 | histone H2A | chr11 | - | View |
Carica papaya | Cpa.g.sc190.23 | supercontig_190 | + | View | |
Chenopodium quinoa | AUR62001828 | Os05g0113900: Probable histone H2A.6 | C_Quinoa_Scaffold_2716 | + | View |
Chenopodium quinoa | AUR62009615 | Os05g0113900: Probable histone H2A.6 | C_Quinoa_Scaffold_2493 | + | View |
Capsella rubella | Carub.0008s2057 | K11251 - histone H2A (H2A) | scaffold_8 | + | View |
Cucumis sativus L. | CsaV3_6G022220 | Histone H2A | chr6 | - | View |
Daucus carota | DCAR_006000 | hypothetical protein | DCARv2_Chr2 | + | View |
Davidia involucrata | Dinv35637 | GWHABJS00000015 | + | View | |
Davidia involucrata | Dinv32865 | GWHABJS00000010 | - | View | |
Durio zibethinus | Duzib168G0962 | NW_019168159.1 | + | View | |
Erigeron canadensis | ECA236G4090 | Conyza_canadensis_scaffold:3 | + | View | |
Erythranthe guttata | Migut.D02117 | scaffold_4 | + | View | |
Erythranthe guttata | Migut.J00363 | scaffold_10 | + | View | |
Eutrema salsugineum | Thhalv10014932m.g | K11251 - histone H2A (H2A) | scaffold_2 | + | View |
Fragaria x ananassa | FAN16G2072 | K11251 - histone H2A (H2A) | Fvb3-3 | - | View |
Fragaria x ananassa | FAN14G2934 | KOG1756 - Histone 2A | Fvb6-1 | - | View |
Fragaria x ananassa | FAN21G3698 | K11251 - histone H2A (H2A) | Fvb3-2 | - | View |
Fragaria x ananassa | FAN11G1102 | K11251 - histone H2A (H2A) | Fvb3-4 | - | View |
Fragaria vesca | FvH4_3g35330 | K11251 - histone H2A (H2A) | Fvb3 | - | View |
Gossypium hirsutum | Gohir.A08G000169 | K11251 - histone H2A (H2A) | A08 | - | View |
Gossypium hirsutum | Gohir.D01G208800 | K11251 - histone H2A (H2A) | D01 | - | View |
Gossypium hirsutum | Gohir.D08G010700 | K11251 - histone H2A (H2A) | D08 | - | View |
Glycine max | Glyma.13G333800 | K11251 - histone H2A (H2A) | Gm13 | - | View |
Glycine max | Glyma.15G040200 | K11251 - histone H2A (H2A) | Gm15 | - | View |
Gossypium raimondii | Gorai.004G004000 | Chr04 | - | View | |
Gossypium raimondii | Gorai.002G254000 | Chr02 | - | View | |
Helianthus annuus | HanXRQChr05g0134281 | Putative histone H2A; Histone-fold; Histone H2A, C-terminal domain; Histone H2A conserved site | HanXRQChr05 | - | View |
Helianthus annuus | HanXRQChr06g0175791 | Putative histone H2A; Histone-fold; Histone H2A, C-terminal domain; Histone H2A conserved site | HanXRQChr06 | + | View |
Hydrangea macrophylla | Hma1.2p1_0035F.1_g022140 | Hma1.2p1_0035F.1 | + | View | |
Lupinus albus | Lalb_Chr01g0003771 | K11251 - histone H2A (H2A) | Lalb_Chr01 | + | View |
Lotus japonicus | Lj3g0000114 | PTHR23430//PTHR23430:SF96 - HISTONE H2A // SUBFAMILY NOT NAMED | chr3 | - | View |
Lonicera japonica | Lj2A1057T50 | GWHAAZE00000002 | - | View | |
Lonicera japonica | Lj1A157T42 | GWHAAZE00000001 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_5_168621 | K11251 - histone H2A (H2A) | Lsat_1_v8_lg_5 | - | View |
Lactuca sativa | Lsat_1_v5_gn_9_22420 | K11251 - histone H2A (H2A) | Lsat_1_v8_lg_9 | - | View |
Lactuca sativa | Lsat_1_v5_gn_8_77801 | K11251 - histone H2A (H2A) | Lsat_1_v8_lg_8 | + | View |
Malus domestica | MD03G1098100 | histone H2A 12 | Chr03 | + | View |
Manihot esculenta | Manes.11G133400 | Chromosome11 | + | View | |
Manihot esculenta | Manes.04G031600 | Chromosome04 | - | View | |
Medicago truncatula | Medtr2g096570 | core histone H2A/H2B/H3/H4 | chr2 | - | View |
Medicago truncatula | Medtr4g063410 | core histone H2A/H2B/H3/H4 | chr4 | - | View |
Nelumbo nucifera | Nn2g10441 | chr2 | + | View | |
Nicotiana tabacum | Nitab4.5_0003782g0030 | Histone-fold, Histone H2A, Histone core | Nitab4.5_0003782 | + | View |
Nicotiana tabacum | Nitab4.5_0000610g0110 | Histone H2A, Histone-fold, Histone core | Nitab4.5_0000610 | + | View |
Punica granatum | PGR119G2120 | NC_045132.1 | + | View | |
Prunus persica | Prupe.6G082300 | K11251 - histone H2A (H2A) | Pp06 | + | View |
Phaseolus vulgaris | Phvul.L003343 | K11251 - histone H2A (H2A) | scaffold_15 | - | View |
Quercus lobata | QL01p033023 | 1 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr5g0063441 | RcHm_v2.0_Chr5 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr3g0467311 | RcHm_v2.0_Chr3 | + | View | |
Rhododendron simsii | Rhsim13G0086000 | chr13 | + | View | |
Salvia bowleyana | SalBow3G3843 | GWHASIU00000006 | + | View | |
Sechium edule | Sed0023753 | LG05 | - | View | |
Schrenkiella parvula | Sp6g21570 | K11251 - histone H2A (H2A) | ch6-6 | - | View |
Solanum pennellii | Sopen11g030880 | Probable histone H2A.3 - Medicago truncatula (Barrel medic), Encodes HTA12, a histone H2A protein. | histone H2A 12 (HTA12) | FUNCTIONS IN: DNA binding | INVOLVED IN: nucleosome assembly | LOCATED IN: nucleus, nucleosome | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Histone H2A , Histone-fold , Histone core | BEST Arabidopsis thaliana protein match is: histone H2A 6 ., Histone-fold | Spenn-ch11 | - | View |
Solanum tuberosum | PGSC0003DMG400015565 | Histone H2A | ST4.03ch11 | - | View |
Trochodendron aralioides | TAR633G0820 | group2 | - | View | |
Trochodendron aralioides | TAR623G0039 | group7 | - | View | |
Trochodendron aralioides | TAR369G0122 | group18 | + | View | |
Theobroma cacao | Thecc.09G326500 | Histone H2A 12 | Chromosome_9 | + | View |
Theobroma cacao | Thecc.05G044600 | Histone H2A 12 | Chromosome_5 | + | View |
Tarenaya hassleriana | THA.LOC104800645 | histone H2A-like | NW_010969548.1 | - | View |
Trifolium pratense | TPR.G34329 | Tp57577_TGAC_v2_LG7 | - | View | |
Tripterygium wilfordii | TWI79G0502 | NC_052238.1 | + | View | |
Tripterygium wilfordii | TWI31G0543 | NC_052233.1 | + | View | |
Vaccinium macrocarpon | vmacro03103 | Similar to Histone H2A (Petroselinum crispum OX%3D4043) | chr9_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vitis vinifera | GSVIVG01025019001 | chr6 | - | View | |
Zea mays | Zm00001eb266530 | Zm00001e029619 Histone H2A | 6 | - | View |