Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 1.1e-181 639.8 319 100.0
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 1.0e-171 606.7 312 97.8
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 2.3e-155 552.4 295 93.6
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 6.8e-147 524.2 313 85.0
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 7.3e-141 504.2 315 82.9
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 3.8e-121 438.7 295 77.6
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 1.5e-117 426.8 331 68.6
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 2.1e-116 422.9 323 70.3
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 3.4e-114 415.6 313 68.1
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 2.9e-113 412.5 315 68.6
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 1.4e-112 410.2 329 67.5
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 1.4e-112 410.2 309 69.3
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 7.1e-112 407.9 302 67.2
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 7.9e-111 404.4 312 68.3
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 1.0e-110 404.1 302 66.9
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 1.0e-110 404.1 320 67.5
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 3.0e-110 402.5 306 66.7
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 5.1e-110 401.7 309 67.3
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 1.1e-109 400.6 327 64.2
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 1.5e-109 400.2 312 67.6
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 3.3e-109 399.1 331 66.2
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 4.3e-109 398.7 307 67.1
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 4.3e-109 398.7 307 67.1
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 5.6e-109 398.3 304 67.4
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 1.6e-108 396.7 334 63.5
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 3.6e-108 395.6 298 67.1
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 6.2e-108 394.8 314 65.0
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 6.2e-108 394.8 340 63.2
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 6.2e-108 394.8 338 64.5
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 3.1e-107 392.5 312 67.3
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 9.0e-107 391.0 314 63.7
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 9.0e-107 391.0 310 63.9
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 2.0e-106 389.8 307 65.8
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 2.6e-106 389.4 307 64.8
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 2.6e-106 389.4 298 68.1
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 2.6e-106 389.4 312 65.4
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 5.8e-106 388.3 273 71.8
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 3.8e-105 385.6 311 64.6
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 4.9e-105 385.2 266 71.1
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 6.4e-105 384.8 274 69.7
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 6.4e-105 384.8 313 63.6
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 2.1e-103 379.8 299 65.2
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 2.7e-103 379.4 313 65.8
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 1.3e-102 377.1 315 64.1
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 1.8e-102 376.7 274 68.6
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 2.3e-102 376.3 290 65.5
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 8.7e-102 374.4 307 64.8
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 2.5e-101 372.9 306 63.4
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 3.3e-101 372.5 318 62.3
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 1.3e-100 370.5 325 62.2
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 1.3e-100 370.5 296 64.5
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 2.1e-100 369.8 269 67.7
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 3.7e-100 369.0 315 62.2
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 8.1e-100 367.9 291 63.9
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 2.4e-99 366.3 315 59.4
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 9.0e-99 364.4 303 64.7
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 1.2e-98 364.0 316 60.8
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 5.8e-98 361.7 313 59.4
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 7.6e-98 361.3 261 69.0
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 7.6e-98 361.3 307 61.2
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 1.0e-97 360.9 252 69.8
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 2.2e-97 359.8 302 61.9
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 2.2e-97 359.8 299 62.5
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 3.8e-97 359.0 302 63.2
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 1.1e-96 357.5 318 59.1
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 1.1e-96 357.5 244 72.1
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 1.4e-96 357.1 295 62.4
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 1.4e-96 357.1 290 63.4
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 1.4e-96 357.1 252 68.7
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 3.2e-96 355.9 289 63.7
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 3.2e-96 355.9 285 62.5
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 5.5e-96 355.1 289 62.6
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 7.1e-96 354.8 289 63.7
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 7.1e-96 354.8 289 63.7
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 9.3e-96 354.4 289 63.3
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 3.5e-95 352.4 290 63.8
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 4.6e-95 352.1 289 63.0
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 7.9e-95 351.3 304 62.2
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 1.3e-94 350.5 296 62.5
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 1.8e-94 350.1 296 61.8
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 1.8e-94 350.1 290 62.8
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 3.9e-94 349.0 304 59.5
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 1.1e-93 347.4 305 63.0
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 2.5e-93 346.3 254 66.9
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 3.7e-92 342.4 308 59.1
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 1.1e-91 340.9 305 58.4
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 2.4e-91 339.7 325 57.5
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 7.2e-88 328.2 305 59.0
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 2.4e-83 313.2 206 73.3
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 1.3e-81 307.4 262 58.8
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 1.7e-81 307.0 311 53.7
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 9.4e-80 301.2 256 59.0
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 9.4e-80 301.2 256 59.0
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 2.0e-77 293.5 292 53.1
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 2.5e-77 293.1 253 55.7
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 4.5e-74 282.3 255 55.3
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 7.7e-74 281.6 312 51.6
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 1.0e-73 281.2 267 53.9
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 6.5e-65 251.9 164 71.3
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 3.6e-63 246.1 174 71.3
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 1.0e-62 244.6 301 47.8
MBI06_g44498_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 7.5e-53 211.8 230 51.3
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 6.3e-52 208.8 305 40.7
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 2.7e-50 203.4 362 38.1
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 8.5e-49 198.4 192 56.8
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 8.5e-49 198.4 115 79.1
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 2.3e-46 190.3 115 78.3
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 2.2e-44 183.7 116 75.9
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 8.6e-41 171.8 107 73.8
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 6.2e-31 139.0 95 69.5
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 1.9e-27 127.5 71 81.7
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 5.6e-16 89.4 305 27.2
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 2.0e-13 80.9 42 83.3
CBR_g3761 Chara braunii HOM05D002121 ORTHO05D008891 3.2e-11 73.6 195 30.3
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 3.5e-10 70.1 34 88.2
Cfa022494 Carpinus fangiana HOM05D002121 ORTHO05D008891 1.0e-09 68.6 129 35.7
PRCOL_00004066 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 2.1e-07 60.8 78 44.9


User provided reference genes

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