Gene: Solyc11g018500.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g018500.3
- Transcript Identifier Solyc11g018500.3.1
- Gene Type Coding gene
- Location SL4.0ch11 : 8711795-8721036 : positive
Gene Family Information
- ID HOM05D000140
- #Genes/#Species 2610/97
- Phylogenetic origin
- ID ORTHO05D000087
- #Genes/#Species 2327/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc11g018500.3.1
- uniprot A0A3Q7ITB1
- gene_id Solyc11g018500
Descriptions
- Description Beta-galactosidase (AHRD V3.3 *** A0A2G2ZPF3_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0008152 | IEA | GOA Database | metabolic process | |
| GO:0009827 | ISO | PLAZA Integrative Orthology | plant-type cell wall modification | AT5G63800 |
| GO:0048354 | ISO | PLAZA Integrative Orthology | mucilage biosynthetic process involved in seed coat development | AT5G63800 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004565 | IBA IEA | GOA Database | beta-galactosidase activity | |
| GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0030246 | ISO | PLAZA Homology (enrichment) | carbohydrate binding | HOM05D000140 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048046 | IEA | GOA Database | apoplast | |
| GO:0005618 | IBA | GOA Database | cell wall | |
| GO:0005773 | IBA | GOA Database | vacuole |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR025300 | Beta-galactosidase jelly roll domain |
| IPR008979 | Galactose-binding-like domain superfamily |
| IPR001944 | Glycoside hydrolase, family 35 |
| IPR041392 | Beta-galactosidase, beta-sandwich domain |
| IPR031330 | Glycoside hydrolase 35, catalytic domain |
| IPR017853 | Glycoside hydrolase superfamily |
| Mapman id | Description |
|---|---|
| 21.3.2.2.3 | Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase (BGAL) |