Gene: Solyc10g049890.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc10g049890.3
  • Transcript Identifier Solyc10g049890.3.1
  • Gene Type Coding gene
  • Location SL4.0ch10 : 46132664-46136234 : positive

Gene Family Information

  • ID HOM05D001181
  • #Genes/#Species 527/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc10g049890.3.1
  • uniprot A0A3Q7IFP1
  • gene_id Solyc10g049890

Descriptions

  • Description D-3-phosphoglycerate dehydrogenase (AHRD V3.3 *** A0A2G2VSK7_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT4G34200
GO:0009643
ISO
PLAZA Integrative Orthologyphotosynthetic acclimation AT3G19480
GO:0009561
ISO
PLAZA Integrative Orthologymegagametogenesis AT4G34200
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G34200
GO:0000096
ISO
PLAZA Integrative Orthologysulfur amino acid metabolic process AT4G34200
GO:0008652
IEA
GOA Databasecellular amino acid biosynthetic process
GO:0006564
IEA
GOA DatabaseL-serine biosynthetic process
GO:0006564
IEA
InterProL-serine biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003954
ISO
PLAZA Integrative OrthologyNADH dehydrogenase activity AT3G19480
GO:0005524
ISO
PLAZA Integrative OrthologyATP binding AT4G34200
GO:0051287
IEA
GOA DatabaseNAD binding
GO:0051287
IEA
InterProNAD binding
GO:0004617
IBA
IEA
GOA Databasephosphoglycerate dehydrogenase activity
GO:0004617
IEA
InterProphosphoglycerate dehydrogenase activity
GO:0016616
IEA
GOA Databaseoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016616
IEA
InterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016491
IEA
GOA Databaseoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
IBA
GOA Databasechloroplast stroma
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT4G34200
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G19480
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G19480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain
IPR006236 D-3-phosphoglycerate dehydrogenase
IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
IPR029009 Allosteric substrate binding domain superfamily
IPR036291 NAD(P)-binding domain superfamily
IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain
Mapman id Description
4.1.4.1.1 Amino acid metabolism.biosynthesis.serine family.non-photorespiratory serine.phosphoglycerate dehydrogenase