Gene: Solyc02g070030.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g070030.4
  • Transcript Identifier Solyc02g070030.4.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 37831053-37839476 : negative

Gene Family Information

  • ID HOM05D004256
  • #Genes/#Species 167/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g070030.4.1
  • uniprot A0A3Q7F3I4
  • gene_id Solyc02g070030

Descriptions

  • Description Small RNA 2'-O-methyltransferase-like (AHRD V3.3 *** A0A2S1CES1_PRUYE)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034587
IBA
GOA DatabasepiRNA metabolic process
GO:0035279
ISO
PLAZA Integrative OrthologymRNA cleavage involved in gene silencing by miRNA AT4G20910
GO:0010305
ISO
PLAZA Integrative Orthologyleaf vascular tissue pattern formation AT4G20910
GO:0061715
ISO
PLAZA Integrative OrthologymiRNA 2'-O-methylation AT4G20910
GO:0010589
ISO
PLAZA Integrative Orthologyleaf proximal/distal pattern formation AT4G20910
GO:0035196
ISO
PLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNA AT4G20910
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT4G20910
GO:0010093
ISO
PLAZA Integrative Orthologyspecification of floral organ identity AT4G20910
GO:0009616
ISO
PLAZA Integrative OrthologyRNAi-mediated antiviral immune response AT4G20910
GO:0030422
IBA
GOA Databaseproduction of siRNA involved in RNA interference
GO:0001510
IEA
GOA DatabaseRNA methylation
GO:0032259
IEA
GOA Databasemethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008171
IBA
IEA
GOA DatabaseO-methyltransferase activity
GO:0008173
IBA
IEA
GOA DatabaseRNA methyltransferase activity
GO:0003755
IEA
InterPropeptidyl-prolyl cis-trans isomerase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR025714 Methyltransferase domain
IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain
IPR040813 Small RNA 2'-O-methyltransferase Hen1, La-motif C-terminal domain
IPR040870 HEN1, double-stranded RNA binding domain 2
Mapman id Description
16.9.3 RNA processing.mRNA silencing.miRNA/siRNA methyltransferase (HEN1)