Gene: Solyc01g088370.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g088370.3
  • Transcript Identifier Solyc01g088370.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 75377289-75382297 : positive

Gene Family Information

  • ID HOM05D002708
  • #Genes/#Species 254/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g088370.3.1
  • uniprot A0A3Q7EK17
  • gene_id Solyc01g088370

Descriptions

  • Description Eukaryotic translation initiation factor 3 subunit B (AHRD V3.3 *** A0A1U8E9Z5_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006413
IBA
IEA
GOA Databasetranslational initiation
GO:0006413
IEA
InterProtranslational initiation
GO:0006412
IEA
GOA Databasetranslation
GO:0002183
IEA
GOA Databasecytoplasmic translational initiation
GO:0001732
IEA
GOA Databaseformation of cytoplasmic translation initiation complex

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003743
IBA
IEA
GOA Databasetranslation initiation factor activity
GO:0003743
IEA
InterProtranslation initiation factor activity
GO:0031369
IEA
GOA Databasetranslation initiation factor binding
GO:0031369
IEA
InterProtranslation initiation factor binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
IEA
InterProprotein binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G25780
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G25780
GO:0005852
IBA
IEA
GOA Databaseeukaryotic translation initiation factor 3 complex
GO:0005852
IEA
InterProeukaryotic translation initiation factor 3 complex
GO:0016282
IEA
GOA Databaseeukaryotic 43S preinitiation complex
GO:0033290
IEA
GOA Databaseeukaryotic 48S preinitiation complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR011400 Eukaryotic translation initiation factor 3 subunit B
IPR034363 eIF3B, RNA recognition motif
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR013979 Translation initiation factor, beta propellor-like domain
IPR035979 RNA-binding domain superfamily
Mapman id Description
17.4.1.3.2 Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF3 mRNA-to-PIC binding complex.component eIF3b