Gene: SGA_v2.0_scaffold90G27770

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold90G27770
  • Transcript Identifier SGA_v2.0_scaffold90T27770
  • Gene Type Coding gene
  • Location scaffold90 : 822949-828775 : negative

Gene Family Information

  • ID HOM05D000234
  • #Genes/#Species 1784/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Argonaute 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009616
ISO
PLAZA Integrative OrthologyRNAi-mediated antiviral immune response AT1G48410
GO:0010305
ISO
PLAZA Integrative Orthologyleaf vascular tissue pattern formation AT1G48410
GO:0016441
ISO
PLAZA Integrative Orthologyposttranscriptional gene silencing AT1G48410
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT1G48410
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA Solyc03g098280.4
GO:0010589
ISO
PLAZA Integrative Orthologyleaf proximal/distal pattern formation AT1G48410
GO:0030154
ISO
PLAZA Integrative Orthologycell differentiation AT1G48410
GO:0045087
ISO
PLAZA Integrative Orthologyinnate immune response AT1G48410
GO:0010218
ISO
PLAZA Integrative Orthologyresponse to far red light AT1G48410
GO:0048830
ISO
PLAZA Integrative Orthologyadventitious root development AT1G48410
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G48410
GO:0009965
ISO
PLAZA Integrative Orthologyleaf morphogenesis AT1G48410
GO:0009955
ISO
PLAZA Integrative Orthologyadaxial/abaxial pattern specification AT1G48410
GO:0009850
ISO
PLAZA Integrative Orthologyauxin metabolic process AT1G48410
GO:0035195
ISO
PLAZA Integrative Orthologygene silencing by miRNA AT1G48410
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G48410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G48410
GO:0005515
IEA
InterProprotein binding
GO:0004521
ISO
PLAZA Integrative Orthologyendoribonuclease activity AT1G48410
GO:0035197
ISO
PLAZA Integrative OrthologysiRNA binding AT1G48410
GO:0035198
ISO
PLAZA Integrative OrthologymiRNA binding AT1G48410
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G48410
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G48410
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G48410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003100 PAZ domain
IPR032473 Protein argonaute, Mid domain
IPR024357 Argonaut, glycine-rich domain
IPR032474 Protein argonaute, N-terminal
IPR014811 Argonaute, linker 1 domain
IPR036085 PAZ domain superfamily
IPR032472 Argonaute linker 2 domain
IPR036397 Ribonuclease H superfamily
IPR012337 Ribonuclease H-like superfamily
IPR003165 Piwi domain
Mapman id Description
16.9.2.7 RNA processing.mRNA silencing.miRNA pathway.miRNA recruiting factor (AGO1/AGO10)