Gene: Pp3c9_3690
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c9_3690
- Transcript Identifier Pp3c9_3690V3.4
- Gene Type Coding gene
- Location Chr09 : 2106147-2109884 : positive
Gene Family Information
- ID HOM05D001546
- #Genes/#Species 413/99
- Phylogenetic origin
- ID ORTHO05D002908
- #Genes/#Species 255/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c9_3690V3.4
- pacid 32911364
- alias Phpat.009G015000
- alias Phypa_221481
- alias Pp1s213_103V6
- uniprot A0A2K1K1V3
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT2G45290 |
| GO:0006098 | IBA | GOA Database | pentose-phosphate shunt |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0050897 | ISO | PLAZA Integrative Orthology | cobalt ion binding | Zm00001eb378030 |
| GO:0030145 | ISO | PLAZA Integrative Orthology | manganese ion binding | Zm00001eb378030 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G60750 |
| GO:0005509 | ISO | PLAZA Integrative Orthology | calcium ion binding | Zm00001eb378030 |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004802 | IBA IEA | GOA Database | transketolase activity | |
| GO:0004802 | IEA | InterPro | transketolase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT2G45290 |
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT2G45290 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT3G60750 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT2G45290 |
| GO:0005829 | IBA | GOA Database | cytosol |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009014 | Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II |
| IPR029061 | Thiamin diphosphate-binding fold |
| IPR033247 | Transketolase family |
| IPR005475 | Transketolase-like, pyrimidine-binding domain |
| IPR005474 | Transketolase, N-terminal |
| IPR033248 | Transketolase, C-terminal domain |
| IPR005478 | Transketolase, bacterial-like |