Gene: Pp3c5_880

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c5_880
  • Transcript Identifier Pp3c5_880V3.2
  • Gene Type Coding gene
  • Location Chr05 : 509077-511627 : negative

Gene Family Information

  • ID HOM05D000245
  • #Genes/#Species 1725/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c5_880V3.2
  • pacid 32956072
  • alias Phypa_9740
  • alias Pp1s259_104V6
  • alias Phpat.005G002600
  • uniprot A0A2K1KHZ0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin Solyc10g050970.1
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT3G14230
GO:0071369
ISO
PLAZA Integrative Orthologycellular response to ethylene stimulus AT1G72360
GO:0010104
ISO
PLAZA Integrative Orthologyregulation of ethylene-activated signaling pathway Solyc10g050970.1
GO:0034059
ISO
PLAZA Integrative Orthologyresponse to anoxia AT1G72360
GO:0010286
ISO
PLAZA Integrative Orthologyheat acclimation AT3G16770
GO:0090357
ISO
PLAZA Integrative Orthologyregulation of tryptophan metabolic process AT4G34410
GO:0010087
ISO
PLAZA Integrative Orthologyphloem or xylem histogenesis AT4G34410
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT1G43160
GO:0051707
ISO
PLAZA Integrative Orthologyresponse to other organism AT3G16770
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT1G43160
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT5G07310
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT1G43160
GO:0009735
ISO
PLAZA Integrative Orthologyresponse to cytokinin AT3G16770
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc01g108240.3
GO:1990110
ISO
PLAZA Integrative Orthologycallus formation AT5G07310
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT4G34410
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G43160
GO:0034605
ISO
PLAZA Integrative Orthologycellular response to heat AT1G43160
GO:0048825
ISO
PLAZA Integrative Orthologycotyledon development AT4G11140
GO:0009788
ISO
PLAZA Integrative Orthologynegative regulation of abscisic acid-activated signaling pathway AT5G64750
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT1G43160
GO:0010928
ISO
PLAZA Integrative Orthologyregulation of auxin mediated signaling pathway AT4G34410
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT5G50080
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT4G34410
GO:0010364
ISO
PLAZA Integrative Orthologyregulation of ethylene biosynthetic process Solyc01g065980.4
GO:0008219
ISO
PLAZA Integrative Orthologycell death AT3G16770
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009873
IEA
GOA Databaseethylene-activated signaling pathway
GO:0009873
IEA
InterProethylene-activated signaling pathway
GO:2000280
ISO
PLAZA Integrative Orthologyregulation of root development AT1G53910
GO:1902074
ISO
PLAZA Integrative Orthologyresponse to salt AT5G64750
GO:0009753
ISO
PLAZA Integrative Orthologyresponse to jasmonic acid AT1G43160
GO:0009751
ISO
PLAZA Integrative Orthologyresponse to salicylic acid AT1G43160
GO:0009749
ISO
PLAZA Integrative Orthologyresponse to glucose AT5G64750
GO:0001666
ISO
PLAZA Integrative Orthologyresponse to hypoxia AT1G53910
GO:0071497
ISO
PLAZA Integrative Orthologycellular response to freezing AT5G13330
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT1G43160
GO:0071454
ISO
PLAZA Integrative Orthologycellular response to anoxia AT1G72360
GO:0070483
ISO
PLAZA Integrative Orthologydetection of hypoxia AT1G53910
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT4G11140
GO:0019760
ISO
PLAZA Integrative Orthologyglucosinolate metabolic process AT5G13330
GO:0071456
ISO
PLAZA Integrative Orthologycellular response to hypoxia AT1G72360
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT5G61890
GO:0062211
ISO
PLAZA Integrative Orthologyroot regeneration AT5G64750
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT1G43160
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene Solyc12g056590.2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G72360
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G07310
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G16770

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT1G72360
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G16770
GO:0005634
IEA
GOA Databasenucleus
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G16770

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016177 DNA-binding domain superfamily
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
IPR044808 Ethylene-responsive transcription factor
Mapman id Description
15.5.7.1 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)