Gene: AT4G34410

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G34410
  • Transcript Identifier AT4G34410.1
  • Gene Type Coding gene
  • Location Chr4 : 16451992-16452798 : positive

Gene Family Information

  • ID HOM05D000245
  • #Genes/#Species 1725/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G34410.1
  • symbol RRTF1
  • Alias ERF109,ethylene response factor 109
  • uniprot Q9SZ06

Descriptions

  • Description redox responsive transcription factor 1
  • Computational description redox responsive transcription factor 1 (RRTF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6148 Blast hits to 5821 proteins in 258 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010200
IEP
GOA Databaseresponse to chitin
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc01g108240.3
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin Solyc10g050970.1
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene Solyc01g108240.3
GO:0010104
ISO
PLAZA Integrative Orthologyregulation of ethylene-activated signaling pathway Solyc10g050970.1
GO:0006355
IEA
Gene Ontologyregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009873
IEA
GOA Databaseethylene-activated signaling pathway
GO:0062211
IMP
Gene Ontologyroot regeneration1
GO:0090357
IEP
Gene Ontologyregulation of tryptophan metabolic process2
GO:0010928
IEP
Gene Ontologyregulation of auxin mediated signaling pathway2
GO:0051301
IEP
Gene Ontologycell division3
GO:0010087
IEP
Gene Ontologyphloem or xylem histogenesis3
GO:0050832
IEP
Gene Ontologydefense response to fungus4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity5
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding6

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
IPR016177 DNA-binding domain superfamily
Mapman id Description
15.5.7.1 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)