Gene: AT1G43160

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G43160
  • Transcript Identifier AT1G43160.1
  • Gene Type Coding gene
  • Location Chr1 : 16263989-16264663 : positive

Gene Family Information

  • ID HOM05D000245
  • #Genes/#Species 1725/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G43160.1
  • symbol RAP2.6
  • uniprot Q7G1L2

Descriptions

  • Description related to AP2 6
  • Computational description related to AP2 6 (RAP2.6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6219 Blast hits to 5840 proteins in 256 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6203; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009658
IMP
Gene Ontologychloroplast organization1
GO:0009873
IEA
GOA Databaseethylene-activated signaling pathway
GO:0009873
IEA
InterProethylene-activated signaling pathway
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated2
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006952
IEA
GOA Databasedefense response
GO:0045893
IDA, IMP
Gene Ontologypositive regulation of transcription, DNA-templated1 3
GO:0034605
IEP
Gene Ontologycellular response to heat4
GO:0009753
IEP
Gene Ontologyresponse to jasmonic acid4
GO:0009751
IEP
Gene Ontologyresponse to salicylic acid4
GO:0009651
IMP, IEP
Gene Ontologyresponse to salt stress3 4
GO:0009414
IEP
Gene Ontologyresponse to water deprivation4
GO:0009737
IEP
Gene Ontologyresponse to abscisic acid3
GO:0009409
IEP
Gene Ontologyresponse to cold3
GO:0006970
IEP
Gene Ontologyresponse to osmotic stress3
GO:0009611
IEP
Gene Ontologyresponse to wounding5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
TAS
Gene OntologyDNA binding2
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS
TAS
Gene OntologyDNA-binding transcription factor activity2 6
GO:0003700
IEA
InterProDNA-binding transcription factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
IPR044808 Ethylene-responsive transcription factor
IPR016177 DNA-binding domain superfamily
Mapman id Description
15.5.7.1 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)