Gene: Pp3c3_20570

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c3_20570
  • Transcript Identifier Pp3c3_20570V3.5
  • Gene Type Coding gene
  • Location Chr03 : 14129174-14132248 : negative

Gene Family Information

  • ID HOM05D000236
  • #Genes/#Species 1775/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c3_20570V3.5
  • pacid 32942280
  • alias Pp1s204_138V6
  • alias Phpat.003G080500
  • alias Phypa_91039
  • uniprot A0A7I4D9J3

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010051
ISO
PLAZA Integrative Orthologyxylem and phloem pattern formation AT5G51590
GO:0010089
ISO
PLAZA Integrative Orthologyxylem development AT5G51590

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003680
IEA
GOA Databaseminor groove of adenine-thymine-rich DNA binding
GO:0003680
IEA
InterProminor groove of adenine-thymine-rich DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G63470
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT4G12080
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT1G63480

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G12080
GO:0098687
ISO
PLAZA Integrative Orthologychromosomal region AT4G12080
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G12080
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G17950
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G12080
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT4G12080

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017956 AT hook, DNA-binding motif
IPR005175 PPC domain
IPR039605 AT-hook motif nuclear-localized protein
Mapman id Description
15.5.8.2 RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-B transcription factor (AHL)