Gene: Pp3c1_37070
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c1_37070
- Transcript Identifier Pp3c1_37070V3.2
- Gene Type Coding gene
- Location Chr01 : 25728766-25730152 : positive
Gene Family Information
- ID HOM05D000183
- #Genes/#Species 2094/97
- Phylogenetic origin
- ID ORTHO05D000100
- #Genes/#Species 2114/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c1_37070V3.2
- pacid 32969830
- alias Phpat.001G149200
- alias Pp1s28_46V6
- uniprot A0A2K1LB90
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048527 | ISO | PLAZA Integrative Orthology | lateral root development | AT1G26960 |
| GO:0030308 | ISO | PLAZA Integrative Orthology | negative regulation of cell growth | AT4G40060 |
| GO:0010434 | ISO | PLAZA Integrative Orthology | bract formation | AT5G03790 |
| GO:0017148 | ISO | PLAZA Integrative Orthology | negative regulation of translation | AT3G01470 |
| GO:0010311 | ISO | PLAZA Integrative Orthology | lateral root formation | AT1G26960 |
| GO:0080022 | ISO | PLAZA Integrative Orthology | primary root development | AT1G69780 |
| GO:0006970 | ISO | PLAZA Integrative Orthology | response to osmotic stress | AT3G61890 |
| GO:0048826 | ISO | PLAZA Integrative Orthology | cotyledon morphogenesis | AT1G69780 |
| GO:0009646 | ISO | PLAZA Integrative Orthology | response to absence of light | AT5G53980 |
| GO:0009965 | ISO | PLAZA Integrative Orthology | leaf morphogenesis | AT1G69780 |
| GO:0009788 | ISO | PLAZA Integrative Orthology | negative regulation of abscisic acid-activated signaling pathway | AT2G22430 |
| GO:0009744 | ISO | PLAZA Integrative Orthology | response to sucrose | AT1G69780 |
| GO:0048573 | ISO | PLAZA Integrative Orthology | photoperiodism, flowering | AT4G40060 |
| GO:0009739 | ISO | PLAZA Integrative Orthology | response to gibberellin | AT1G26960 |
| GO:0009738 | ISO | PLAZA Integrative Orthology | abscisic acid-activated signaling pathway | AT2G22430 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT3G61890 |
| GO:0001558 | ISO | PLAZA Integrative Orthology | regulation of cell growth | AT3G01470 |
| GO:0048510 | ISO | PLAZA Integrative Orthology | regulation of timing of transition from vegetative to reproductive phase | AT5G03790 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006357 | IEA | GOA Database | regulation of transcription by RNA polymerase II | |
| GO:0045893 | IBA | GOA Database | positive regulation of transcription, DNA-templated | |
| GO:0010582 | ISO | PLAZA Integrative Orthology | floral meristem determinacy | AT5G03790 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT3G61890 |
| GO:0022622 | ISO | PLAZA Integrative Orthology | root system development | AT1G26960 |
| GO:0009637 | ISO | PLAZA Integrative Orthology | response to blue light | AT5G53980 |
| GO:0009615 | ISO | PLAZA Integrative Orthology | response to virus | AT3G61890 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT3G61890 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT5G66700 |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT5G66700 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT5G65310 |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT2G22430 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G61890 |
| GO:0043565 | IBA IEA | GOA Database | sequence-specific DNA binding | |
| GO:0043565 | IEA | InterPro | sequence-specific DNA binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000981 | IEA | GOA Database | DNA-binding transcription factor activity, RNA polymerase II-specific | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G53980 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.3.1 | RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II) |