Gene: AT5G65310

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G65310
  • Transcript Identifier AT5G65310.1
  • Gene Type Coding gene
  • Location Chr5 : 26102457-26104217 : negative

Gene Family Information

  • ID HOM05D000183
  • #Genes/#Species 2094/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G65310.1
  • symbol HB5
  • Alias ATHB-5,ATHB5,homeobox protein 5
  • uniprot P46667

Descriptions

  • Description homeobox protein 5
  • Computational description homeobox protein 5 (HB5); FUNCTIONS IN: sequence-specific DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of transcription, abscisic acid mediated signaling pathway, regulation of abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
ISS
Gene Ontologyregulation of transcription, DNA-templated1
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0045893
IDA
IBA
Gene Ontologypositive regulation of transcription, DNA-templated2 3
GO:0009738
TAS
Gene Ontologyabscisic acid-activated signaling pathway4
GO:0009737
IDA, IMP
Gene Ontologyresponse to abscisic acid4
GO:0009787
NAS
Gene Ontologyregulation of abscisic acid-activated signaling pathway

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding5
GO:0043565
IDA
IBA
IEA
Gene Ontologysequence-specific DNA binding3 6
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000981
IEA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003700
ISS
TAS
Gene OntologyDNA-binding transcription factor activity4 7
GO:0042803
IDA
Gene Ontologyprotein homodimerization activity6

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001356 Homeobox domain
IPR009057 Homeobox-like domain superfamily
IPR000047 Helix-turn-helix motif
IPR003106 Leucine zipper, homeobox-associated
Mapman id Description
15.5.3.1 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)