Gene: AT3G61890

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G61890
  • Transcript Identifier AT3G61890.1
  • Gene Type Coding gene
  • Location Chr3 : 22914346-22915239 : negative

Gene Family Information

  • ID HOM05D000183
  • #Genes/#Species 2094/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G61890.1
  • symbol HB-12
  • Alias ATHB-12,homeobox 12,ATHB12,ARABIDOPSIS THALIANA HOMEOBOX 12
  • uniprot Q9M276

Descriptions

  • Description homeobox 12
  • Computational description homeobox 12 (HB-12); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox 7 (TAIR:AT2G46680.1); Has 10279 Blast hits to 10246 proteins in 542 species: Archae - 1; Bacteria - 17; Metazoa - 7845; Fungi - 173; Plants - 2032; Viruses - 4; Other Eukaryotes - 207 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009737
IMP, IEP
Gene Ontologyresponse to abscisic acid1 2
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0045893
IDA
IBA
Gene Ontologypositive regulation of transcription, DNA-templated3 4
GO:0006970
IEP
Gene Ontologyresponse to osmotic stress1
GO:0009615
IEP
Gene Ontologyresponse to virus5
GO:0009414
IEP
Gene Ontologyresponse to water deprivation6
GO:0009651
IGI
Gene Ontologyresponse to salt stress7

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IBA
Gene Ontologysequence-specific DNA binding4
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000981
IEA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding8
GO:0005515
IPI
Gene Ontologyprotein binding9
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity10

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus4 7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001356 Homeobox domain
IPR000047 Helix-turn-helix motif
IPR009057 Homeobox-like domain superfamily
IPR003106 Leucine zipper, homeobox-associated
Mapman id Description
15.5.3.1 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)