Gene: AT2G22430

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G22430
  • Transcript Identifier AT2G22430.1
  • Gene Type Coding gene
  • Location Chr2 : 9526470-9527612 : negative

Gene Family Information

  • ID HOM05D000183
  • #Genes/#Species 2094/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G22430.1
  • symbol HB6
  • Alias ATHB6,homeobox protein 6
  • uniprot P46668

Descriptions

  • Description homeobox protein 6
  • Computational description homeobox protein 6 (HB6); FUNCTIONS IN: protein binding, sequence-specific DNA binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, positive regulation of transcription, abscisic acid mediated signaling pathway, negative regulation of abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 10935 Blast hits to 10899 proteins in 558 species: Archae - 5; Bacteria - 20; Metazoa - 8544; Fungi - 195; Plants - 1932; Viruses - 5; Other Eukaryotes - 234 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009738
IEA
GOA Databaseabscisic acid-activated signaling pathway
GO:0009738
TAS
Gene Ontologyabscisic acid-activated signaling pathway1
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0045893
IDA
IBA
Gene Ontologypositive regulation of transcription, DNA-templated2 3
GO:0009788
IMP
Gene Ontologynegative regulation of abscisic acid-activated signaling pathway1
GO:0009414
IEP
Gene Ontologyresponse to water deprivation4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding5
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IDA
IBA
Gene Ontologysequence-specific DNA binding3 6
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IDA
Gene OntologyDNA binding1
GO:0003677
IEA
InterProDNA binding
GO:0000981
IEA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0003700
ISS
TAS
Gene OntologyDNA-binding transcription factor activity1 7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus3 8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001356 Homeobox domain
IPR000047 Helix-turn-helix motif
IPR003106 Leucine zipper, homeobox-associated
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.3.1 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)