Gene: AT5G03790

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G03790
  • Transcript Identifier AT5G03790.1
  • Gene Type Coding gene
  • Location Chr5 : 1004985-1006373 : positive

Gene Family Information

  • ID HOM05D000183
  • #Genes/#Species 2094/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G03790.1
  • symbol HB51
  • Alias ATHB51,LMI1,LATE MERISTEM IDENTITY1
  • uniprot Q9LZR0

Descriptions

  • Description homeobox 51
  • Computational description homeobox 51 (HB51); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 22 (TAIR:AT2G36610.1); Has 11020 Blast hits to 10992 proteins in 578 species: Archae - 2; Bacteria - 0; Metazoa - 8622; Fungi - 156; Plants - 2028; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010582
IGI
Gene Ontologyfloral meristem determinacy1
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0045893
IGI
IBA
Gene Ontologypositive regulation of transcription, DNA-templated2 3
GO:0048510
IGI
Gene Ontologyregulation of timing of transition from vegetative to reproductive phase2
GO:0010434
IGI
Gene Ontologybract formation2
GO:0009965
IMP
Gene Ontologyleaf morphogenesis2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0043565
IDA
IBA
Gene Ontologysequence-specific DNA binding2 3
GO:0000981
IEA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001356 Homeobox domain
IPR000047 Helix-turn-helix motif
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.3.1 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)