Gene: Pp3c11_23290
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c11_23290
- Transcript Identifier Pp3c11_23290V3.2
- Gene Type Coding gene
- Location Chr11 : 15302924-15304847 : negative
Gene Family Information
- ID HOM05D000245
- #Genes/#Species 1725/99
- Phylogenetic origin
- ID ORTHO05D000020
- #Genes/#Species 4054/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c11_23290V3.2
- pacid 32956650
- alias Pp1s31_112V6
- alias Phypa_119930
- uniprot A0A2K1JVY0
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009723 | ISO | PLAZA Integrative Orthology | response to ethylene | Solyc01g108240.3 |
| GO:0034605 | ISO | PLAZA Integrative Orthology | cellular response to heat | AT1G43160 |
| GO:0001666 | ISO | PLAZA Integrative Orthology | response to hypoxia | AT1G53910 |
| GO:0071497 | ISO | PLAZA Integrative Orthology | cellular response to freezing | AT5G13330 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT1G43160 |
| GO:0070483 | ISO | PLAZA Integrative Orthology | detection of hypoxia | AT1G53910 |
| GO:0048366 | ISO | PLAZA Integrative Orthology | leaf development | AT4G11140 |
| GO:0019760 | ISO | PLAZA Integrative Orthology | glucosinolate metabolic process | AT5G13330 |
| GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | AT4G34410 |
| GO:0062211 | ISO | PLAZA Integrative Orthology | root regeneration | AT4G34410 |
| GO:0006970 | ISO | PLAZA Integrative Orthology | response to osmotic stress | AT1G43160 |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT1G43160 |
| GO:0048825 | ISO | PLAZA Integrative Orthology | cotyledon development | AT4G11140 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT1G43160 |
| GO:0010928 | ISO | PLAZA Integrative Orthology | regulation of auxin mediated signaling pathway | AT4G34410 |
| GO:0048510 | ISO | PLAZA Integrative Orthology | regulation of timing of transition from vegetative to reproductive phase | AT5G50080 |
| GO:0010104 | ISO | PLAZA Integrative Orthology | regulation of ethylene-activated signaling pathway | Solyc10g050970.1 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT4G34410 |
| GO:0010364 | ISO | PLAZA Integrative Orthology | regulation of ethylene biosynthetic process | Solyc01g065980.4 |
| GO:0010087 | ISO | PLAZA Integrative Orthology | phloem or xylem histogenesis | AT4G34410 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009873 | IEA | GOA Database | ethylene-activated signaling pathway | |
| GO:0009873 | IEA | InterPro | ethylene-activated signaling pathway | |
| GO:2000280 | ISO | PLAZA Integrative Orthology | regulation of root development | AT1G53910 |
| GO:0090357 | ISO | PLAZA Integrative Orthology | regulation of tryptophan metabolic process | AT4G34410 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT1G43160 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT1G43160 |
| GO:0009753 | ISO | PLAZA Integrative Orthology | response to jasmonic acid | AT1G43160 |
| GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | AT1G43160 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT1G43160 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | Solyc10g050970.1 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc01g108240.3 |
| GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT4G34410 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G53910 |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G53910 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G53910 |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |