Gene: Potri.005G204400

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.005G204400
  • Transcript Identifier Potri.005G204400.1
  • Gene Type Coding gene
  • Location Chr05 : 20947218-20955164 : positive

Gene Family Information

  • ID HOM05D004503
  • #Genes/#Species 160/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.005G204400.v4.1
  • pacid 42802728
  • synonym Pt-VCL1.4

Descriptions

  • Description PF04841 - Vps16, N-terminal region (Vps16_N)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0007033
IEA
InterProvacuole organization
GO:0045992
ISO
PLAZA Integrative Orthologynegative regulation of embryonic development AT2G38020
GO:0051469
ISO
PLAZA Integrative Orthologyvesicle fusion with vacuole AT2G38020

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0009705
ISO
PLAZA Integrative Orthologyplant-type vacuole membrane AT2G38020
GO:0033263
ISO
PLAZA Integrative OrthologyCORVET complex AT2G38020
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT2G38020
GO:0030897
ISO
PLAZA Integrative OrthologyHOPS complex AT2G38020

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038132 Vps16, C-terminal domain superfamily
IPR006926 Vps16, N-terminal
IPR016534 Vacuolar protein sorting-associated protein 16
IPR006925 Vps16, C-terminal
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
22.3.4.9.2 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.component VPS16/VCL1