Gene: Phvul.008G206500
General Information
Structural Information
- Species Phaseolus vulgaris
- Gene Identifier Phvul.008G206500
- Transcript Identifier Phvul.008G206500.1
- Gene Type Coding gene
- Location Chr08 : 55428828-55434198 : negative
Gene Family Information
- ID HOM05D000234
- #Genes/#Species 1784/99
- Phylogenetic origin
- ID ORTHO05D001258
- #Genes/#Species 445/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Phvul.008G206500.v2.1
- pacid 37158233
Descriptions
- Description PTHR22891:SF20 - PROTEIN ARGONAUTE 4-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006306 | ISO | PLAZA Integrative Orthology | DNA methylation | AT2G32940 |
| GO:0031047 | ISO | PLAZA Integrative Orthology | gene silencing by RNA | Solyc01g096750.1 |
| GO:0051607 | ISO | PLAZA Integrative Orthology | defense response to virus | AT2G32940 |
| GO:0006342 | ISO | PLAZA Integrative Orthology | chromatin silencing | AT2G32940 |
| GO:0030422 | ISO | PLAZA Integrative Orthology | production of siRNA involved in RNA interference | AT2G32940 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0035197 | ISO | PLAZA Integrative Orthology | siRNA binding | AT2G32940 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G32940 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR032474 | Protein argonaute, N-terminal |
| IPR032473 | Protein argonaute, Mid domain |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR014811 | Argonaute, linker 1 domain |
| IPR003165 | Piwi domain |
| IPR036085 | PAZ domain superfamily |
| IPR032472 | Argonaute linker 2 domain |
| IPR036397 | Ribonuclease H superfamily |
| IPR003100 | PAZ domain |
| Mapman id | Description |
|---|---|
| 12.5.1.13 | Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.siRNA-integrating factor (AGO) |