Gene: PGSC0003DMG401023772

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG401023772
  • Transcript Identifier PGSC0003DMT400061098
  • Gene Type Coding gene
  • Location ST4.03ch01 : 80591936-80598529 : negative

Gene Family Information

  • ID HOM05D005536
  • #Genes/#Species 139/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37435549
  • id PGSC0003DMG401023772.v4.03
  • uniprot M1C722

Descriptions

  • Description Phosphomethylpyrimidine kinase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009228
IBA
IEA
GOA Databasethiamine biosynthetic process
GO:0009228
IEA
InterProthiamine biosynthetic process
GO:0008152
IEA
GOA Databasemetabolic process
GO:0016310
IEA
GOA Databasephosphorylation
GO:0009229
IEA
GOA Databasethiamine diphosphate biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0008902
IBA
GOA Databasehydroxymethylpyrimidine kinase activity
GO:0008972
IBA
IEA
GOA Databasephosphomethylpyrimidine kinase activity
GO:0008972
IEA
InterProphosphomethylpyrimidine kinase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0004789
IEA
GOA Databasethiamine-phosphate diphosphorylase activity
GO:0004789
IEA
InterProthiamine-phosphate diphosphorylase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G22940
GO:0005829
IBA
GOA Databasecytosol
GO:0009507
IBA
GOA Databasechloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022998 Thiamine phosphate synthase/TenI
IPR034291 Thiamine phosphate synthase
IPR013785 Aldolase-type TIM barrel
IPR029056 Ribokinase-like
IPR036206 Thiamin phosphate synthase superfamily
IPR045029 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase domain
IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase
Mapman id Description
7.2.1.2 Coenzyme metabolism.thiamine pyrophosphate biosynthesis.hydroxymethylpyrimidine diphosphate biosynthesis.bifunctional hydroxymethylpyrimidine kinase and thiamine-phosphate diphosphorylase (Th1)