Gene: PGR142G3517

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR142G3517
  • Transcript Identifier PGR142G3517.02
  • Gene Type Coding gene
  • Location NC_045128.1 : 34036775-34042973 : negative

Gene Family Information

  • ID HOM05D000234
  • #Genes/#Species 1784/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031383813.1
  • name LOC116197725
  • name XM_031527953.1
  • id gene-LOC116197725
  • uniprot A0A6P8CN68

Descriptions

  • product protein argonaute 10, transcript variant X2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031047
IEA
GOA Databasegene silencing by RNA
GO:1902183
ISO
PLAZA Integrative Orthologyregulation of shoot apical meristem development AT5G43810
GO:0019827
ISO
PLAZA Integrative Orthologystem cell population maintenance Os06g0597400
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development Os06g0597400
GO:0035019
ISO
PLAZA Integrative Orthologysomatic stem cell population maintenance AT5G43810
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT5G43810
GO:0009934
ISO
PLAZA Integrative Orthologyregulation of meristem structural organization AT5G43810
GO:0010586
ISO
PLAZA Integrative OrthologymiRNA metabolic process AT5G43810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0035198
ISO
PLAZA Integrative OrthologymiRNA binding AT5G43810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G43810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003100 PAZ domain
IPR036085 PAZ domain superfamily
IPR032474 Protein argonaute, N-terminal
IPR032472 Argonaute linker 2 domain
IPR036397 Ribonuclease H superfamily
IPR012337 Ribonuclease H-like superfamily
IPR014811 Argonaute, linker 1 domain
IPR003165 Piwi domain
IPR032473 Protein argonaute, Mid domain
Mapman id Description
16.9.2.7 RNA processing.mRNA silencing.miRNA pathway.miRNA recruiting factor (AGO1/AGO10)