Gene: AT4G36050

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G36050
  • Transcript Identifier AT4G36050.3
  • Gene Type Coding gene
  • Location Chr4 : 17052345-17055044 : negative

Gene Family Information

  • ID HOM05D005767
  • #Genes/#Species 135/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G36050.3
  • uniprot F4JNY0

Descriptions

  • Description endonuclease/exonuclease/phosphatase family protein
  • Computational description endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: zinc ion binding, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Exodeoxyribonuclease III xth (InterPro:IPR004808), Zinc finger, GRF-type (InterPro:IPR010666); Has 2122 Blast hits to 1069 proteins in 229 species: Archae - 0; Bacteria - 153; Metazoa - 440; Fungi - 325; Plants - 79; Viruses - 2; Other Eukaryotes - 1123 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IGI
Gene OntologyDNA repair1
GO:0006281
IEA
InterProDNA repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0098506
IEA
GOA Databasepolynucleotide 3' dephosphorylation
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0006284
IBA
Gene Ontologybase-excision repair2
GO:0080111
IGI
Gene OntologyDNA demethylation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004518
IEA
InterPronuclease activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0004528
IBA
GOA Databasephosphodiesterase I activity
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004527
IEA
GOA Databaseexonuclease activity
GO:0004527
IDA
Gene Ontologyexonuclease activity1
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0008311
IBA
Gene Ontologydouble-stranded DNA 3'-5' exodeoxyribonuclease activity2
GO:0008081
IBA
Gene Ontologyphosphoric diester hydrolase activity2
GO:0003906
IBA
Gene OntologyDNA-(apurinic or apyrimidinic site) endonuclease activity2
GO:0046403
IDA
Gene Ontologypolynucleotide 3'-phosphatase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IBA
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036691 Endonuclease/exonuclease/phosphatase superfamily
IPR010666 Zinc finger, GRF-type
IPR005135 Endonuclease/exonuclease/phosphatase
IPR004808 AP endonuclease 1
Mapman id Description
14.5.10.2 DNA damage response.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.AP-endonuclease (APE2)