Gene: PGR004G0721

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR004G0721
  • Transcript Identifier PGR004G0721.01
  • Gene Type Coding gene
  • Location NC_045131.1 : 9102577-9105444 : positive

Gene Family Information

  • ID HOM05D005933
  • #Genes/#Species 132/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031398724.1
  • name LOC116209269
  • name XM_031542864.1
  • id gene-LOC116209269
  • uniprot A0A6P8DWG8

Descriptions

  • product cytoplasmic tRNA 2-thiolation protein 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002098
IEA
GOA DatabasetRNA wobble uridine modification
GO:0002098
IEA
InterProtRNA wobble uridine modification
GO:0034227
IEA
GOA DatabasetRNA thio-modification
GO:0034227
IEA
InterProtRNA thio-modification
GO:0032447
IEA
GOA Databaseprotein urmylation
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0010311
ISO
PLAZA Integrative Orthologylateral root formation AT4G35910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000049
IEA
GOA DatabasetRNA binding
GO:0000049
IEA
InterProtRNA binding
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0016783
ISO
PLAZA Integrative Orthologysulfurtransferase activity AT4G35910

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019407 Cytoplasmic tRNA 2-thiolation protein 2
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
Mapman id Description
16.5.5.1.4.2 RNA processing.RNA modification.thiolation.CTU1-URM1 pathway.CTU1-CTU2 tRNA thiouridylase complex.component CTU2