Gene: AT4G35910

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G35910
  • Transcript Identifier AT4G35910.1
  • Gene Type Coding gene
  • Location Chr4 : 17008817-17011014 : negative

Gene Family Information

  • ID HOM05D005933
  • #Genes/#Species 132/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G35910.1
  • Alias CTU2,CYTOPLASMIC THIOURIDYLASE 2
  • uniprot O65628

Descriptions

  • Description Adenine nucleotide alpha hydrolases-like superfamily protein
  • Computational description Adenine nucleotide alpha hydrolases-like superfamily protein; CONTAINS InterPro DOMAIN/s: Thiouridylase, cytoplasmic, subunit 2 (InterPro:IPR019407); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034227
IEA
GOA DatabasetRNA thio-modification
GO:0034227
IMP
Gene OntologytRNA thio-modification1
GO:0034227
IEA
InterProtRNA thio-modification
GO:0002098
IEA
GOA DatabasetRNA wobble uridine modification
GO:0002098
IEA
InterProtRNA wobble uridine modification
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0032447
IEA
GOA Databaseprotein urmylation
GO:0002143
IBA
Gene OntologytRNA wobble position uridine thiolation2
GO:0010311
IMP
Gene Ontologylateral root formation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0000049
IEA
Gene OntologytRNA binding
GO:0000049
IEA
InterProtRNA binding
GO:0016783
IMP
IBA
Gene Ontologysulfurtransferase activity1 2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005829
IBA
Gene Ontologycytosol2
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR019407 Cytoplasmic tRNA 2-thiolation protein 2
Mapman id Description
16.5.5.1.4.2 RNA processing.RNA modification.thiolation.CTU1-URM1 pathway.CTU1-CTU2 tRNA thiouridylase complex.component CTU2